Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010952.1 Length=2605 Score E Sequences producing significant alignments: (Bits) Value seq19028 136 6e-29 >seq19028 Length=31091 Score = 136 bits (150), Expect = 6e-29 Identities = 455/696 (65%), Gaps = 39/696 (6%) Strand=Plus/Plus Query 1505 TTTTCCTCTTTGCTCAGGAAGTCTTTATAGCTAGCACCCTCACCAGGATTGCACAGCACG 1564 |||||||| | | ||||| ||||||||||| | | |||||||||||||| | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1565 ATTGATGGGATTCCACCTTTAATTTGGACTGGCTTCCCGTATTTGCAATTTGACTG--CC 1622 |||| || || ||||| || || | || ||| | |||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1623 AGTCTTTTTGGGCCCCGACAAGTTCTTTCCAGTGCTTTAGCTTTAGGTAGTGCGGTGCAA 1682 | | |||||||||| | || ||||| |||||||||| | | ||||| | | Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT------AATGCGGATCGA 13999 Query 1683 CGTCATCAATGACGTTATAATCCA--CCTCGTTCGAGAACACTCTTGGATTGAAGTCCAG 1740 ||| |||||||| |||||| ||| | | || || | | | | ||| || || | Sbjct 14000 CGTTATCAATGATGTTATA--CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAA 14057 Query 1741 ATGTCCACTTAGGTAATTGTGTGGGCCTGAGGCACGAGCCCACATCGTCTTCCCTGTTCT 1800 ||| || | ||||||||| ||||| ||| | | | |||||| |||||||||||||| Sbjct 14058 ATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCT 14117 Query 1801 CGAATCACCTTCCACTATGATACTCATCGGTC-TCTCTGGCCGCGCAGCGGAACCTCTCC 1859 || ||||| || | | |||||| | |||| | |||||||||||||| | | || Sbjct 14118 AGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC---CC 14174 Query 1860 CAAAATAATCGTCAGCCCACTCTTGCATCTCGTCAGGAACGTTAGTGAAAGAGGAGAGGG 1919 || || || | ||||| ||| ||| || || |||| || || Sbjct 14175 TAACATTTTCAGCTGCCCA-----GCA-CTC------AA--TTGTTGAAGGAAGAACAAC 14220 Query 1920 GAAACGGAGGAGCCCATGGTTCCGGATCCTTCATGAAAATCCTATCCAGGTTACTGGA-- 1977 ||| ||| | | | ||||| ||| |||||| || | ||| | || |||| Sbjct 14221 TAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTT--TGGAAC 14278 Query 1978 TAGGTTGTGATACTGAAAGAGAAACTTCTCCGGCAACTTCTCCTTGACTATTCTCATGGC 2037 || || ||||| ||||| |||||||| | |||| || || | | || | || Sbjct 14279 TATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGC 14338 Query 2038 CGCCTCCTTTGTTCCAGAATTTAATGCTTCGGCGGCTGCATCGTTAGATGTTTGCTGACC 2097 | || ||| | || | |||| ||||| || | | |||| || | ||| || ||| Sbjct 14339 TTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACC 14398 Query 2098 GCCTCGAGCACTTCTTCCGTCGATCTGGAACACTCCCCATTCGATGGTGTCCCCGTCCTT 2157 |||| |||| || ||| ||||| || || ||||| ||| || || | ||| || Sbjct 14399 TCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTT 14458 Query 2158 CTCGACGTAGGACTTGACGTCGGAGCTGGATTTAGC 2193 | ||| ||| ||| || || || |||||||| Sbjct 14459 CGCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8224239025578