Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011024.1 Length=2771 Score E Sequences producing significant alignments: (Bits) Value seq19028 446 3e-122 >seq19028 Length=31091 Score = 446 bits (494), Expect = 3e-122 Identities = 1049/1573 (67%), Gaps = 103/1573 (7%) Strand=Plus/Plus Query 970 GAATCATACTGAGAATGCCTTGTTATTGTATATGGCTTGTACTCATGCTTCTAACCCAGT 1029 || ||||||||| ||||| ||||| |||||| || |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1030 GTACGCTACATTGAAAATACGTATTTATTTTTATGATGCTGTAACAAATTAATAAAGATT 1089 || ||| ||| || ||| | |||||||||||| |||| |||||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1090 AAATTTTATTTCATGATTTTCAGCTACATCAATTGTTCCTTCAAATACATCATACAATAC 1149 |||||||||||||||| |||| |||||| | |||| |||| ||||| | ||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1150 ATAATCAACTGCTCTAATAACATTATTTAAAGAAATTACACCCAAATTATTCAAATATTT 1209 || || || |||||||||| ||| || | | ||| ||||| || | ||| |||| Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1210 ACAAACTTGATATTTAAATACTCTTAAAAAATGACCAGTCGGAGACTGTAAAGTCGTCCA 1269 || || |||||||||||||||| ||| ||||||| ||||| |||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1270 AATGCGGAAGTTGAGAAAACATTTGTGAATCCCCAGTTCCTTCCTCAAATTGTGGTTGAA 1329 || ||||||||| ||| |||||||| |||||||||||||| ||||||||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1330 TCTGATTTGGAATATTAGTGTGTTGTACTTGTTGTTGAATGGGT---TCT--GATTGTGT 1384 || ||||| | | | | ||| | ||||| |||| || ||| ||||||| Sbjct 13437 TCGAATTTGTATTTCGATTATGTCG-----GTTGTCGAATTTGTTGGTCTGAGATTGTGG 13491 Query 1385 TTGGTTATCTTGAAATATAG--------GGGATTT------------GTTATCCCGAAGG 1424 ||| |||||||||||||| |||| ||| | || | Sbjct 13492 TTGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACG 13551 Query 1425 TATAAACGCCACTCGTTGCTTGAAGCGCAGTGATGTACTCCCCTGTGCGTAAATCCATGA 1484 || |||||| || | ||||| | ||||||||||| ||||||||||||| |||||||| Sbjct 13552 ACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGA 13611 Query 1485 TTTATGCAGTCTAAGTGTATGTAATA-TGAGCATCCACAGTCCAGATCGACCCTTCTACG 1543 ||| |||| | | |||| ||| |||||||| ||| || | | ||| | Sbjct 13612 CCAGAACAG-CTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCT 13670 Query 1544 CCTCACCTGCCTCTTCTTG----GCG---------ATGTGGT-------GTTGTATTTTG 1583 || | || ||||||||| || ||| ||| |||||| || Sbjct 13671 TCTGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATG 13730 Query 1584 -----------ATGGGTAT--------CTG--TGAACAATGGCTGGTGGATGGTGACGAA 1622 || || || ||| ||| ||||| || ||||||| ||| Sbjct 13731 TCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAA 13790 Query 1623 GATCGCATTCTTAATAGCCCAATTTTTTAATGGTTGGtttttttCTTCGTCGAGATATTC 1682 ||||| | | || ||||||||||||| |||||||| || ||||| | || Sbjct 13791 TTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTC 13850 Query 1683 TTTAAATGATGATTGT-GGGCCTGGATTGCAGAGGAAGATAGTGGGAATGCCTCCTTTAA 1741 |||| | | || || || || |||||||| | |||||| || || || || || || | Sbjct 13851 TTTATA-GCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTA 13909 Query 1742 TTTGAATGGGCTTCCCATACTTGGTGTTGCTCTGCCAGTCTCTTTGGGCCCCCATAAACT 1801 | | | ||| | || || || ||||| ||| | ||||||||||||||||||| Sbjct 13910 TCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACT 13969 Query 1802 CTTTAAAGTGCTTTAAATAATGCGGGTCGACGTCATCAATGACGTTATACCAAGCATTAT 1861 ||||||||||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||| Sbjct 13970 CTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTAT 14029 Query 1862 TGCTGTATACTTTTTGACTGAGGTCAAGATGGCCGCACAAATAATTATGTGGGCCTAAGG 1921 | || | ||| | | | | || | ||| ||||| | ||||||||||| ||||| | Sbjct 14030 TTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAG 14089 Query 1922 AACGGGCCCACATGGTCTTTCCTGTCCGGCTGTCACCCTCAATCACTATACTTACCGGTC 1981 | | |||||| ||||| ||||| | ||||||||||| || ||||| |||| Sbjct 14090 ATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTC 14149 Query 1982 -TCCAAGGCCGCGCAGCGGCATCCATGACGTTCTCGGCGACCCACTCTTCAAGTTCATCT 2040 | | |||||||||||||||||| | || || || || |||| |||| Sbjct 14150 GTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA-------- 14201 Query 2041 GGAACTTGATTAAAAGAAGAAGAAAGAAATGGAGAAACATAAACTTCTAAAGGAGGACTA 2100 ||| || || |||||| || ||| ||| ||||||| ||| ||| || | Sbjct 14202 -----TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATG 14255 Query 2101 AAAATCCTATCTAAATTTGAACTTAAATTATGAAATTGTAAAATATAGTCCTTTGGGGCC 2160 || || | |||||| |||| | || ||||||| |||| ||||| | | || ||| Sbjct 14256 AATATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCA 14313 Query 2161 TTCTCT-TTTAAT-ATATTGAGGGCCTC-GGATTTACTGCCTGAATTGAGTGCTTCGGCA 2217 || | | | |||| ||| || || || | || || | | | | ||||| ||| Sbjct 14314 TTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG-TAGCACTTAACGCTTCTGCA 14372 Query 2218 TATGCGTCGTTGGCAGATTGCTGACCTCCTCTAGCTGATCTGCCATCGATTTGGAAAACT 2277 || | || || | | || |||||||||||| |||| ||||||||||| ||| Sbjct 14373 GATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTG 14432 Query 2278 CCAAAATCAATGAATTCTCCGTCTTTCTCCACGTAGGTCTTGACATCTGTTGAGCTCTTA 2337 || | || || | || | ||||||| | | ||| |||| ||||||| || ||| Sbjct 14433 CCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTA 14492 Query 2338 GCTGCCTGAATGTTCGGATGGAAATGTGCTGACCTGTTTGGGGAT--ACCAGGTCGAAGA 2395 || | || | ||| || ||| ||||| || | || | |||| | | |||||| Sbjct 14493 GCGGATTGGAAGTTTGGGTGG-TATGTGGTG-CTAGTATTAGGATGGATGATATCGAAGT 14550 Query 2396 ACCGTTGGTTTTTACATTGGTATTTGCCTTCGAATTGGATAAGCACATGGAGATGTGGTT 2455 | ||||| || |||| |||||||||||||| ||||| ||||| ||| || Sbjct 14551 GTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATT 14610 Query 2456 CCCCATTCTCGTG 2468 |||||| || ||| Sbjct 14611 CCCCATCCTGGTG 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8751956321520