Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011052.2 Length=2780 Score E Sequences producing significant alignments: (Bits) Value seq19028 230 4e-57 >seq19028 Length=31091 Score = 230 bits (254), Expect = 4e-57 Identities = 400/588 (68%), Gaps = 21/588 (4%) Strand=Plus/Plus Query 1704 CCTGGATTGCAGAGGAAGATAGTGGGTATTCCACCTTTAATTTGAACTGGCTTTCCGTAT 1763 || |||||||| | |||||| || ||||| ||||| || || | || ||| |||||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1764 TTACAATTGCTTTGCCAGTCTTTCTGGGCCCCCATGAACTCTTTAAAGTGCTTTAGGTAT 1823 || ||||| ||| | | ||||||||||| |||||||||||||||||||| || Sbjct 13930 TTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAA 13989 Query 1824 TGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTATACACCTTTGGACTC 1883 || || | ||||| |||||||| ||||||||| ||| | || ||| | || | || Sbjct 13990 TGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTC 14049 Query 1884 AAGTCCAAATGCCCACACAGATAATTATGTGGGCCTAAGGATCTAGCCCAAACTGTTTTA 1943 || || ||||| || || || ||||||||||| ||||| ||||| ||||| |||| || Sbjct 14050 AAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTC 14109 Query 1944 CCCATTCTACTTGGGCCTTCTATAACTATACTTATGGG-CCTCTCTGGCCGCGCAGCGGC 2002 || ||||| || || || || ||||| |||| | | ||||||||||||||| Sbjct 14110 CCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGC 14169 Query 2003 ATCCATGACATTCTCAGCAGCCCAATCACTGATAATGTCAGGAACATTATTGAAAGAAGA 2062 |||| | ||||| ||||| |||| | |||| | ||| ||||| ||||| Sbjct 14170 ATCCCTAACATTTTCAGCTGCCC-AGCACTCA-------------ATTGTTGAAGGAAGA 14215 Query 2063 AATGGAAAAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNAATATCCTATCTAAATTGCT 2122 | ||||||| ||||| | |||||| || Sbjct 14216 ACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGG 14275 Query 2123 AACTAAATTATGATATTGAAATATAAATTTTTCAGGGAGTTTCTCCCTGATTATTTGTAA 2182 ||||| ||||||||||||||||| ||| ||| | || | ||| || || || | | || Sbjct 14276 AACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAA--TAGAA 14333 Query 2183 AGCAGCGTCCTTACTTCCT---GCATTTAATGCTTCTGCTGCTGCGTCGTTAGCAGTCTG 2239 ||| || || | | || | ||| |||| |||||||| | | | || || | || || Sbjct 14334 AGC-GCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATG 14392 Query 2240 CTGGCCTCCTCTAGCAGATCTGCCGTCGACCTGGAATTCTCCCCATTC 2287 |||||||||||||||| || |||| || || | ||||| || Sbjct 14393 TGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTC 14440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8780745651525