Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011096.1 Length=2794 Score E Sequences producing significant alignments: (Bits) Value seq19028 275 1e-70 >seq19028 Length=31091 Score = 275 bits (304), Expect = 1e-70 Identities = 493/715 (69%), Gaps = 24/715 (3%) Strand=Plus/Plus Query 1677 ATTTTTCACCTCGTCTAGATACTCCTTATATGATGATGTCGGGCCTGGATTGCAGAGGAA 1736 |||||| |||| || || |||| ||||| || || || || |||||||| | ||| Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1737 GATAGTGGGAATTCCACCTTTAATTTGAATGGGCTTCCCGTACTTCGTGTTGCTTTGCCA 1796 ||| || || || ||||| || || | | ||| | ||||| || ||||| ||| Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCA 13946 Query 1797 GTCTCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTGAGATAGTGGGGATCGACGTCATC 1856 | |||||||||||||| |||||||||||||| || ||||| || |||||||||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1857 AATGACGTTATACCAAGCATCATTTGAATACACCTTTGGACTCAGGTCTAGATGCCCACA 1916 ||||| ||||||||| |||| ||||||||| | || | ||| |||| ||| || || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1917 CAAATAATTGTGTGGACCTAGTGACCTGGCCCACATTGTCTTGCCTGTACGACTATCACC 1976 | ||||| ||||| |||| || || |||||| |||||| ||||| | | ||||| Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1977 TTCAATAACTATACTAATCGGTC-TCCAAGGCCGCGCAGCGGCACTCCTGACATTCTCAG 2035 ||||| || ||||| | |||| | | ||||||||||||||| ||| ||||| |||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAG 14186 Query 2036 AGACCCACTCTTCAAGTTCTTCTGGAACTTGATTAAAAGAAGAAGATAAAAAGGGAGAAA 2095 |||| |||| ||| || || |||||| | ||| ||| || Sbjct 14187 CTGCCCAGCACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTAA 14232 Query 2096 TATATGGCTCCGGAGGAGCCATGAAAATCCTATCTAAATTATTATTTAAATTATGAAATT 2155 ||| || || ||||| | |||||| || | |||||| || | || ||||||| ||| Sbjct 14233 CATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATT 14292 Query 2156 GTAATACAAAATCTTTCGGTGCTAATTCTTTAAGTATTGCAAGAGCTTC-TGGCTTACTG 2214 | |||| ||| | | || | |||| ||| || | ||| ||||| | || || Sbjct 14293 GAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG 14352 Query 2215 CCTGAGTTAATTGCTTTGGCGTAAGCGTCGTTTGCTGTCTGTTGTCCCCCTCTTGCAGAT 2274 | |||| |||| || | | || |||| ||| ||| || ||||| |||||| Sbjct 14353 TAGCACTTAA-CGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGAT 14411 Query 2275 CGTCCATCGATCTGAAACTCTCCCCATTCAAGGGTG---TCTCCGTCTTTATCGATATAG 2331 ||||||||||| ||||| | ||||| || |||| || | |||||| |||| || Sbjct 14412 CGTCCATCGATTTGAAAATTGCCCCAGTC---GGTGTAATCACAGTCTTTCGCGATGTAT 14468 Query 2332 GACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTG 2386 ||| || || || |||||||| || | |||||| ||| ||||| || Sbjct 14469 TTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG 14522 Score = 232 bits (256), Expect = 1e-57 Identities = 389/558 (70%), Gaps = 31/558 (6%) Strand=Plus/Plus Query 992 CATACTGAGAATGCTTTGTTGTTGTATATGGCTTGTACTCATGCTTCTAATCCCGTGTAT 1051 |||||||| ||||| |||| ||||||| || |||||||| |||||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1052 GCTACTCTGAAAATACGCATCTATTTCTATGATGCAGTTACGAATTAATAAATATTAAAT 1111 |||| ||| || ||||| ||||| ||||| || | |||||||||||||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1112 TTTATTTCATGTTGTTCTAATACA--CAATTTGTACCTTCAAGTACGTTGTACAATACAT 1169 ||||||||||| | ||| | |||| || | | | | |||| ||| ||| | ||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGC--TCAATTACATTGAATAATACAT 13258 Query 1170 GATCAACTGCTCTAATAATTGTATTAATTGAAATTACACCTAAATTATCTAAATACTTTA 1229 || || ||||||||||| | ||||| ||| |||||||| |||||| | || | Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1230 AAACTTGAACCCTAAATACCCTTAAGAAACGACCAGTCTGAGGGCGTAAGCTCGTCCATA 1289 || ||| ||||||| ||||||||| ||| |||| ||||| | |||| | Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1290 CTTTGAAGTTCAGAAAACACTTGTGAATCCCCAACGCCTTCCGCAGGTTGTGGTTGAACC 1349 |||||||| || ||| ||||||| || |||||| ||||||||||||||| | Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1350 TGATTTGAACTGAGATTATGTCGTGTTG--GTAGTTGAACGGTCTCTCGTCGTGGTTGGT 1407 ||||| | | |||||||||| |||| | | ||| ||||| | ||||||| Sbjct 13439 GAATTTGTATTTCGATTATGTCG-GTTGTCGAATTTG-TTGGTCTGAGATTGTGGTTGAG 13496 Query 1408 TATCTTGAAATACAG-GGGATTTTGTATCTCCCAGATA------------AAA------- 1447 ||||||||||| || | | ||| ||||| ||| ||| Sbjct 13497 GATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAG 13556 Query 1448 ACGCCATTCCGAGCTTGATGCGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGATTACT 1507 ||||||||| ||||| || ||||||||| ||||||||||||| |||||||| | Sbjct 13557 ACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAGA 13616 Query 1508 GCAGTTAATATGTATGAA 1525 ||| |||||| | |||| Sbjct 13617 ACAGCTAATATTTTTGAA 13634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8825529053755