Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011181.1 Length=2660 Score E Sequences producing significant alignments: (Bits) Value seq19028 163 5e-37 >seq19028 Length=31091 Score = 163 bits (180), Expect = 5e-37 Identities = 463/697 (66%), Gaps = 41/697 (6%) Strand=Plus/Plus Query 1575 TTTTCCTCCTTGTCTAGGAAGTCTTTATAGCTAGCCCCCTCTCCAGGATTGCACAGCACG 1634 |||||||||| | ||||| ||||||||||| | ||||||||||||| | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1635 ATTGATGGGATGCCACCTTTAATTTGAACTGGCTTTCCGTATTTGCAATTTGACTG--CC 1692 |||| || || ||||| || || | || ||| |||||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1693 AGTCTTTTTGAGCACCAATCAATTCCTTCCAGTGCTTTAACTTTAGATATTGCGGTGTGA 1752 | | |||| || || || || || || ||||||||| |||| ||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTA------GATAATGCGGATCGA 13999 Query 1753 CATCGTCAATGACGTTGTATTCCA--CTTCGTTCGAGTAAACCTTAGAATTGAAGTCCAG 1810 | | ||||||| ||| || ||| | | || || |||| ||| ||| || || | Sbjct 14000 CGTTATCAATGATGTTATA--CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAA 14057 Query 1811 ATGACCACTCAAGTAATTATGTGGGCCTAACGCACGAGCCCACATCGTCTTCCCTGTCCT 1870 |||||| | | |||||||||||| ||||| | | |||||| ||||||||||| || Sbjct 14058 ATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCT 14117 Query 1871 TGAATCACCTTCGACTATCAAACTCATAGGTC-TGAATGGCCGCGCAGCGGAACCTCTCC 1929 || ||||| || | | | |||| | |||| | |||||||||||||||| | | || Sbjct 14118 AGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC---CC 14174 Query 1930 CAAAATATTCATCGGCCCACTCTTGCATCTCGTCGGGAACGTTAGTGAAGGAGGAGAGGT 1989 || || |||| | ||||| ||| ||| || || ||||||| || Sbjct 14175 TAACATTTTCAGCTGCCCA-----GCA-CTC------AA--TTGTTGAAGGAAGAACAAC 14220 Query 1990 TAAACGGAGGAACCCACGGCTCCGGAGCCTTTGAGAAAATTCTATCTAAATTAGAATTTA 2049 |||| ||| ||| | || || |||| ||| |||| |||||| || | | || Sbjct 14221 TAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTA 14280 Query 2050 AATTATGAAACTGAAAAAGATATTTCTCTGGCAATTTTTCCCGAATTAACTGAAGAGC-- 2107 ||||||| | ||||| ||| | || |||||| |||||| | ||| | ||| || Sbjct 14281 TATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTT 14340 Query 2108 CGTCTGTTTATCAGGAGCGTTTAACGCCTCAGCTGCAGCGTCATTAGCTGTCTGTTGGCC 2167 | || || || | ||| ||||||| || || | | ||||| | ||| ||| || Sbjct 14341 CTTCAATTGAT--GTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACC 14398 Query 2168 TCCCCTAGAACTCCTTCCGTCGACCTGGAAGTCACCCCATTCTACTGT-ATCTCCATCTT 2226 ||| |||| | | ||| |||| || || | ||||| || ||| ||| | |||| Sbjct 14399 TCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTC-GGTGTAATCACAGTCTT 14457 Query 2227 TGTCGATGTAAGACTTGACGTCGGAGCTGGATTTAGC 2263 | ||||||| ||| || || || |||||||| Sbjct 14458 TCGCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8400175683068