Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011268.1 Length=2743 Score E Sequences producing significant alignments: (Bits) Value seq19028 376 4e-101 >seq19028 Length=31091 Score = 376 bits (416), Expect = 4e-101 Identities = 647/921 (70%), Gaps = 39/921 (4%) Strand=Plus/Plus Query 1662 ACTCTTTATAGCTCGAATGGGGCCCAGGATTGCAGAGGAAGATTGTCGGAATGCCTCC-T 1720 ||||||||||||| ||| || ||||||||||| | |||||||||||| || || || | Sbjct 13847 ACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCT 13906 Query 1721 TTAACTTGAACGGGCTTTCCATACTTTGTGTTGCTTTGCCAGTCTCTCTGGGCCCCCATA 1780 ||| ||| | | ||| |||| || ||| ||||| ||| | || |||||||||||| Sbjct 13907 TTATCTTTA-CAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATA 13965 Query 1781 AATTCCTTGAAGTGCTTGAGATAATGCGGATCAACATCATCAATGACGTTATACCATACG 1840 || || || |||||||| |||||||||||||| || | |||||||| ||||||||| | Sbjct 13966 AACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCA 14025 Query 1841 TCATTACTATAGACTCTTGGACTGAGATCCAAGTGACCGCATAAATAATTGTGTGGGCCG 1900 | ||| ||| | | | | | | ||| || |||||||||| ||||| ||||| || Sbjct 14026 TTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCT 14085 Query 1901 AGAGACCGAGCCCACATTGTCTTCCCAATACGACTATCACCCTCTAAAACAATACTTATG 1960 | ||| | |||||| ||||||||| | | | |||||||| | |||||||| || Sbjct 14086 AAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTG 14145 Query 1961 GGTC-TAAAAGGCCGCGCAGCGGGACTGACAATATTTTCTGAGGCCCAAATCTCGAGTTC 2019 |||| | || ||||||||||||| | || |||||| | ||||| ||| | | Sbjct 14146 GGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAATTGT 14205 Query 2020 TTCTGGAACTCGATCAAACGAACAAAGAGGATAAGGAGAAACATAATCTACTCTAAGAGG 2079 | |||| ||| ||| || ||||| ||||||| | | | | || Sbjct 14206 TGAAGGAAG-------AAC-AACTAA------AAGGACTAACATAAGGTTCAGGAGGGGG 14251 Query 2080 TGTAAATATCTCCCTCTCTAGATTGGACTTTAAATTATGATACTGAAAAATATAATCTCT 2139 | ||||| || ||| | ||||| | | ||||||||| ||||| || || || | Sbjct 14252 CATGAATAT-TCGATCTA-ATTTTGGAACT-ATATTATGATATTGAAA--TAGAAACTTT 14306 Query 2140 G--GGCATCTT--CACGGATA-TAGCTAGAGCAGCTTCTGCA---GACCCAGAGTTTAAG 2191 | ||||| || | | ||| ||| | ||| |||||| || || || |||| Sbjct 14307 GCTGGCATTTTTTCTCTAATAATAG--AAAGC-GCTTCTTCAATTGATGTAGCACTTAAC 14363 Query 2192 GCCTCCGCTGCAGCATCATTAGCTGTCTGTTGACCTCCTCTAGCAGATCTTCCATCGATC 2251 || || || | ||||||| | ||| ||| ||||||||||||||||| ||||||||| Sbjct 14364 GCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATT 14423 Query 2252 TGAAAGAACCCCCAGTCGATGAAATCTCCGTCCTTCTCGATATAGGACTTAACATCAGAG 2311 ||||| ||||||||| || |||| | ||| ||| |||| || ||||||||| || Sbjct 14424 TGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAA 14483 Query 2312 GAGGACTTAGCTCCCTGGATATTTGGATGGAATTGGGAGGAGCTATGAGGATGGATGAGA 2371 || || ||||| |||| ||||| ||| || || | ||| ||||||||||| | Sbjct 14484 GATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAGGATGGATGATA 14543 Query 2372 TCGAAATGTCTTGCATTTCTGAATCTGGCCTTACCCTTGAACTGGATAAGGGCATGGATA 2431 ||||| ||||| | ||||| ||| ||||| || | ||| || |||||||||||| || Sbjct 14544 TCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTA 14603 Query 2432 TGCAGTGACCCATCCTCGTGTTTCTCCTGCGCGACTCTAATAAATAATTTATCAGAAGGA 2491 || | | |||||||| |||||| || || ||||||| ||| | ||||| |||||| Sbjct 14604 TGAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCTA--AAACAGTTTATTTGAAGGA 14661 Query 2492 CAGGATA--TGTTTCGCAGGAGATCCAAGACTGTCTCCTTGGATAATGGGCATTTGGGAT 2549 || || | ||||| || | | || |||| | || || | | || ||||| ||| Sbjct 14662 CAAGAAACCTGTTT--CAAGTGCTCTAAGATTTGATCTTTAGGAAGAGGACATTTTGGAA 14719 Query 2550 AAGTGAGGAATATGTTTTTAG 2570 | || || ||||||||||||| Sbjct 14720 ATGTAAGAAATATGTTTTTAG 14740 Score = 131 bits (144), Expect = 3e-27 Identities = 250/364 (69%), Gaps = 11/364 (3%) Strand=Plus/Plus Query 972 CATACTGAGAATGCGTTATTATTGTACATGGCATGTACGCATGCATCAAATCCAGTGTAT 1031 |||||||| ||||| ||| ||||| || | || |||||||| ||||| || ||| Sbjct 13084 CATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1032 GCAACATTGAAAATACGCATATATTTCTACGACTCAGTATCAAATTAATTAAACATT--A 1089 || ||| || ||||| ||||| || || |||||||||||| |||| ||| | Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAA-TAAATATTGAA 13199 Query 1090 TTTCATTGC--TCTGTTCA---ACCTGCATCGTATGATGCAGTACATTATACAATACATG 1144 ||| ||| | | |||| || | || || || | | |||||| | ||||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1145 ATCTACAGCTTTAATTACAAGATTAATAGAAATTACACCTAATCTATCTAAATATCTAAT 1204 ||||||||| |||| | | |||||| ||| |||||||||| |||||| || | || Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1205 AACTTGAGTCTTAAAGACTCGTAAGAACATCCCAGTCTGAATCCGTGAACGAGTCCAGAC 1264 || || ||||| |||| |||||| | ||| || ||| ||||||||| || Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1265 TTTGAAGCTCAGGAAGCACTTGTGTATCTGTAGTGCTTGCCTGAGATTGTGATTGAATTG 1324 |||||| | ||||| ||||| | | ||| | | ||| || ||||| |||||| | Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1325 TATT 1328 ||| Sbjct 13440 AATT 13443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8665680093462