Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011309.1 Length=2757 Score E Sequences producing significant alignments: (Bits) Value seq19028 232 1e-57 >seq19028 Length=31091 Score = 232 bits (256), Expect = 1e-57 Identities = 265/355 (75%), Gaps = 1/355 (0%) Strand=Plus/Plus Query 1668 ACTCTTTATAGCTGGAAGTTGGCCCAGGATTGCAGAGGAAGATTGTCGGAATGCCCCCTT 1727 ||||||||||||||||||| || ||||||||||| | |||||||||||| || || || | Sbjct 13847 ACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCT 13906 Query 1728 TAATTTGAACGGGCTTTCCATACTTGGTGTTACTTTGCCAGTCTCTCTGGGCCCCCATAA 1787 | || | || ||| |||| || || || || ||| | || ||||||||||||| Sbjct 13907 TTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAA 13966 Query 1788 ATTCCTTGAAGTGCTTGAGATAATGCGGATCAACATCATCAATGACGTTATACCATACGT 1847 | || || |||||||| |||||||||||||| || | |||||||| ||||||||| | | Sbjct 13967 ACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCAT 14026 Query 1848 CATTACTATAGACTCTTGGACTGAGATCCAAGTGACCGCATAAATAGTTGTGTGAACCCA 1907 ||| ||| | | | | | | ||| || |||||||||| || || |||| || | Sbjct 14027 TATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTA 14086 Query 1908 ATGACCTGGCCCACAGTGTTTTACCAGTACGACTATTACCCTCTATGACTATACTCATGG 1967 | || || |||||| ||| || || || | | | |||||| ||||| |||||| ||| Sbjct 14087 AAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGG 14146 Query 1968 GTC-TCAAAGGCCGCGCAGCGGCATCCACCACATTCTCGGCAGCCCATTCCTCAA 2021 ||| | || |||||||||||||||||| ||||| || || ||||| ||||| Sbjct 14147 GTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA 14201 Score = 143 bits (158), Expect = 5e-31 Identities = 266/387 (69%), Gaps = 9/387 (2%) Strand=Plus/Plus Query 962 GAATCATACGGAGAATGCGTTGATGTTGTATATGGCGTGTACGCACGCCTCTAACCCTGT 1021 || |||||| || ||||| ||| |||||||| | || || || ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1022 GTATGCTACGATGAAGATACGGATCTATTTCTATGATTCAGTATCGAATTAATAAAGACG 1081 ||| ||| |||| | ||| | ||||| ||||| ||||| |||||||||| | Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1082 AAATATTATTTCATTGCTTTGTTCAAC-ATTTGCATCGT--GATGCAGTACATTATACAA 1138 ||| ||||||||| | ||||| | | || || | | | |||||| | || Sbjct 13197 GAATTTTATTTCATGA---TATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAA 13253 Query 1139 TACATGATCTACAGCTCTAATTACAAGATTAATAGAAATTACACCTAATCTATCTAAATA 1198 ||||| |||||||||||||| | | |||||| ||| |||||||||| |||||| | Sbjct 13254 TACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAA 13313 Query 1199 TCTAATAACTTGAGTCTTAAAGACTCGTAAGAACATCCCAGTCGGAATCCGTGAACGAGT 1258 | | || || || ||||| |||| |||||| | |||||| ||| ||||||| Sbjct 13314 TTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGT 13373 Query 1259 CCAGACTTTGAAGCTCAGGAAGCACTTGTGTATCTGTAGTGCTTGCCTGAGATTGTGATT 1318 || || |||||| | ||||| ||||| | | ||| | | ||| || ||||| || Sbjct 13374 CCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTT 13433 Query 1319 GAATTGTATTCGGATGTGTATGATGTC 1345 |||| | ||| | || | || ||||| Sbjct 13434 GAATCGAATTTGTATTTCGATTATGTC 13460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8710463969914