Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011348.1 Length=2630 Score E Sequences producing significant alignments: (Bits) Value seq19028 156 7e-35 >seq19028 Length=31091 Score = 156 bits (172), Expect = 7e-35 Identities = 541/824 (66%), Gaps = 45/824 (5%) Strand=Plus/Plus Query 1520 TTTTCCTCTTTGTCCAGGAAAGCTTTATAGCTAGCACCCTCACCAGGATTGCAAAGCACG 1579 |||||||| | | ||||| |||||||||| | | |||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1580 ATTGATGGGATTCCACCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTTGACTG--CC 1637 |||| || || ||||| || || | || ||| | |||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1638 AGTCTTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGA 1697 | | |||||||||| || || ||||| |||||||||| ||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGA 13999 Query 1698 CGTCATCAATGACGTTATACTCCACTTCATTCGAAAAGACTCGACCATTGAAGTCCAGGT 1757 ||| |||||||| ||||||| | | ||| ||| | | | | ||| || || | | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1758 GTCCACTTAGATAATTATGTGGGCCTAACGCACGAGCCCACATGGTCTTCCCTGTCCTTG 1817 | || | ||| ||||||||||| ||||| | | |||||| ||||||||||| || | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1818 AATCACCTTCTACGATGATACTCAATGGTC-TCTGTGGCCGCGCAGCGGAACCTCTTCCA 1876 | ||||| || | || |||||| |||| | |||||||||||||| | | || | Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---A 14176 Query 1877 AAATAATCATCCGCCCACTCCTGCATCTCATCGGGAACGTTAGTGAAGGACGAGAGTTGA 1936 | || ||| | ||||| ||| |||| || ||||||| || | Sbjct 14177 ACATTTTCAGCTGCCCA-----GCA-CTCA--------ATTGTTGAAGGAAGAACAACTA 14222 Query 1937 AACGGAGGAACCCACGGTTCCGGAGCCTTTTTGAATATCCTCTCT-AGATTGGAGCGGAT 1995 || ||| ||| | ||||| |||| ||||||| | ||| | ||||| | || Sbjct 14223 AAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAAC-TAT 14281 Query 1996 GTTATGATTCTGCAAGACGAAATCTTT--TGGCTGTTCTTCCCTTAAAACCGCCATGGCA 2053 ||||||| || || | |||| |||| |||| || ||| || | || | | || Sbjct 14282 ATTATGATATTGAAATA-GAAA-CTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCT 14339 Query 2054 GATTGAACAGAATCTGCATTTAACGCCTTGGCATATGAATCATTAGCAGACTGCTTGCCT 2113 || || || ||| ||||||| | ||| || |||||| | | || ||| Sbjct 14340 TCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCT 14399 Query 2114 CCTCTAGCAGATCTGCCGTCGATCTGGAATTCTCCCCATTCCAGTGT-ATCTCCGTCCTT 2172 ||||||||||||| || ||||| || || | ||||| | | |||| ||| | ||| || Sbjct 14400 CCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGT-CGGTGTAATCACAGTCTTT 14458 Query 2173 GTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATG 2232 ||||||| ||| || || || |||||||| || | ||| || ||| ||| Sbjct 14459 CGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATG 14517 Query 2233 TGCTGACCTGGT-TGGGGA--GACCAGATCGAAGAATCTGTTATTCTTGCATTGGTATTT 2289 || || || || | ||| || | ||||||| ||| || | |||| || Sbjct 14518 TGGTG--CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTT 14575 Query 2290 TCCTTCGAACTGTATGAGCACATGGAGATGAGGCTCCCCATTCT 2333 |||||||| || || || ||||| |||| ||||||| || Sbjct 14576 GCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCT 14619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8304210233528