Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011583.1 Length=2797 Score E Sequences producing significant alignments: (Bits) Value seq19028 219 7e-54 >seq19028 Length=31091 Score = 219 bits (242), Expect = 7e-54 Identities = 544/812 (67%), Gaps = 33/812 (4%) Strand=Plus/Plus Query 1686 TTCTTTTCCTCGTCCAGAAACTCTTTATATGATGATGTTGGGCCCGGATTGCAGAGGAAG 1745 || |||||||| || || ||||||||||| || || || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1746 ATAGTGGGAATGCCGCCTTTAATTTGAATCGGCTTCCCGTACTTTGTATTGCTTTGCCAG 1805 || || || || || || || || | | ||| | ||||| ||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1806 TCCCTTTGGGCCCCCATGAATTCTTTGAAGTGTTTGAGGTAGTGGGGGTCGACGTCATCA 1865 | |||||||||||||| || ||||| ||||| || || || || || ||||||| |||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1866 ATGACGTTGTACCAGGCGTCGTTGCTGTAGACCTTTGGACTAAGATCCAGGTGTCCACAC 1925 |||| ||| |||||||| | || || | || | | | ||| | || || || Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1926 AAGTAGTTGTGTGGACCCAAAGAGCGGGCCCACATCGTCTTCCCCGTCCTACTATCGCCC 1985 | ||| || ||||| || ||||| | |||||| |||||||| || ||| || ||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1986 TCGATGACGATACTAGTAGGTC-TCCATGGCCGCGCAGCGGAACCCATCACGTTCTCGGA 2044 || ||||| ||||| | |||| | ||||||||||||||| | || | || || || | Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGC 14187 Query 2045 AACCCAATCTTCAAGTTCCTCAGGAACGTTAGTGAAAGAAGATGAAAGAAATGGAGAAAC 2104 |||| || |||| || |||| ||||| || ||| ||| ||| Sbjct 14188 TGCCCA----GCA-----CTCA-----ATTGTTGAAGGAAGAACAACTAAAAGGACTAAC 14233 Query 2105 ATAAGGAGTCAG--AGGCTCTTGAAAAATCCTATCTAAATTGCTATGTAAATTATGAAAC 2162 |||||| |||| || | || || || | |||||| || | || ||||||| | Sbjct 14234 ATAAGG-TTCAGGAGGGGGCATG-AATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 2163 TGTAAAACAAAATCTTTTGGAGCTAGTTCGCGTATTACATTAAGAGCCTCTGACTTATTT 2222 || || | ||| | | ||| | ||| | || | | ||| || ||| | | || Sbjct 14292 TGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCT---TCAATT 14348 Query 2223 GCTG----AGTTAAGAGCCTTGGCGTAAGCGTCATTGGCTGATTGTTGTCCTCCTCGAGC 2278 | || | |||| || | || | | ||||| | || ||| ||||||| ||| Sbjct 14349 GATGTAGCACTTAA-CGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGC 14407 Query 2279 AGATCGTCCGTCGATCTGAAACGTGCCCCATTGGATGGTGTCTCCGTCCTTGTCCATATA 2338 ||||||||| ||||| ||||| ||||||| | | || || | ||| || | || || Sbjct 14408 AGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTA 14467 Query 2339 GGACTGGACGTCGGAGCTTGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCG 2398 || || || || ||||||||| || | |||||| ||| ||||| || | Sbjct 14468 TTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG-CTA 14525 Query 2399 GGATGGGGAT--ATGAGGTCGAAGAATCGATGGTTGGTACAATTGT-ACTTGCCCTCGAA 2455 | || |||| |||| |||||| || | |||| || |||||| |||||| ||||| Sbjct 14526 GTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTA-AATTGTGCCTTGCCTTCGAA 14584 Query 2456 CTGAATGAGGGCATGCAGATGAGGTTCCCCAT 2487 ||||| |||||||| |||| |||||||| Sbjct 14585 TTGAATAAGGGCATGGCTATGAAATTCCCCAT 14616 Score = 150 bits (166), Expect = 3e-33 Identities = 267/387 (69%), Gaps = 7/387 (2%) Strand=Plus/Plus Query 996 GAATCATACTGAGAATGCGTTGTTATTGTATATGGCATGTACACATGCCGCTAATCCTGT 1055 || ||||||||| ||||| ||||| |||||| | || ||||| |||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1056 GTACGCTACGCTGAAAATACGCATCTATTTTTATGATGCAGTGACAAATTAATAAAGGTT 1115 || ||| ||| || ||||| ||||||||||| || |||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1116 GAATTTTATTGCATGTTGCTCCGTAACTTGGAGCGTGTTTAGTAA--TACATCGTACATA 1173 |||||||||| |||| | || || | | ||||| | | ||||| | | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCAC--TGTTTGCTCAATTACATTGAATAAT 13254 Query 1174 ACATGATCAACAGCTTGAAGTACAGTGTTAATGGAAATAACGCCTATCATATCCAAATAC 1233 |||| || |||||| || | | ||||||| |||||| |||| || ||| | Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1234 TTGAGCATTTGATATCTAAATACTCTTAAGAAAAGACCAGTCTGAGGCCGTAAGGTCGTC 1293 || | | || || |||||||||||||||||| ||| |||| ||||| ||| Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1294 CAGACCCTGAAGTTGAGAAAACACTTGTGAATCCCCAATGCCTTCCGGAGGTTGTGGTTG 1353 | || | |||||||||| ||| ||||||| || | |||||| |||||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1354 AACCGTATCTGGAGTGTGATGATGTCG 1380 || || || || | | ||| |||||| Sbjct 13435 AATCGAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8835125497090