Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011919.1 Length=2751 Score E Sequences producing significant alignments: (Bits) Value seq19028 224 2e-55 >seq19028 Length=31091 Score = 224 bits (248), Expect = 2e-55 Identities = 463/682 (68%), Gaps = 25/682 (4%) Strand=Plus/Plus Query 1641 TTTCCTCGTCCAGGAATTCTTTATAACATGAGTTGGGCCCAGGATTGCAGAGGAAGATTG 1700 ||||||| || ||||| |||||||| | || | || ||||||||||| | |||||||| Sbjct 13832 TTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTG 13891 Query 1701 TGGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTACTTGGTGTTTGATTG-CCAGTCC 1759 | ||||| || || || || | || ||| | ||||| || || | | | ||| | Sbjct 13892 TCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTG 13950 Query 1760 CTTTGGGCCCCCATGAACTCTTTAAAGTGTTTGAGGAAATGCGGGTCGACATCATCAATG 1819 |||||||||||||| |||||||||||||| || || ||||||| ||||| | ||||||| Sbjct 13951 CTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATG 14010 Query 1820 ACGTTGTACCACGCATCATTGCTGTACACTTTAGGGCTTAGATCTAGATGACCACATAAA 1879 | ||| ||||| |||| ||| || | |||| | | ||||| |||||| |||| Sbjct 14011 ATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGG 14070 Query 1880 TAGTTATGTGGGCCTAATGACCTAGCCCACATTGTTTTGCCAGTACGACTGTCTCCCTCT 1939 || |||||||| ||||| || || |||||| ||| || || || | | || ||||| Sbjct 14071 TAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCA 14130 Query 1940 AAGACTAAACTCAAAGGACG-CAGAGGCCGCGCAGCGGCGTCCACGACATTTTCAGATAC 1998 | ||| | |||| || || | |||||||||||||| ||| |||||||||| | | Sbjct 14131 ATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGC 14190 Query 1999 CCATTCTTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGATGAAAAAGGAGAAACATA 2058 ||| |||| ||| | ||| |||||| | ||||||| |||||| Sbjct 14191 CCAGCACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATA 14236 Query 2059 AACCTCCAAGGGAGGTGTAAAAATCCTATCTAAATTGGCATTTAAATTATGAAATTGTAA 2118 | || || || | || || | |||||| || | | || ||||||| |||| || Sbjct 14237 AGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTGAAA 14296 Query 2119 TACATAATCCTTAGGTG---CTAACTCCCTAATGACTTTAAGAGCCTC-TGACTTACTGC 2174 || | | ||| | || | || ||||| | ||| || || | | || || Sbjct 14297 TAGAAA---CTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG- 14352 Query 2175 CTGCGTTAAGTGCTGCGGCGTAAGCGTCGTTGGCTGTTTGCTGTCCCCCTCTTGCAGATC 2234 || | | ||| | || | | || || | ||| || || ||||| ||||||| Sbjct 14353 TAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATC 14412 Query 2235 GTCCATCGATCTGAAACTCTCCCCATTCGAGGGTGTCTCCGTCCTTGTCGATGTAGGACT 2294 |||||||||| ||||| | ||||| ||| | || | ||| || ||||||| || Sbjct 14413 GTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCT 14472 Query 2295 TGACATCTGAGCTTGATTTAGC 2316 | |||||||| ||||||||| Sbjct 14473 TAACATCTGAAGATGATTTAGC 14494 Score = 93.3 bits (102), Expect = 7e-16 Identities = 242/367 (66%), Gaps = 9/367 (2%) Strand=Plus/Plus Query 944 GAATCATACCGAGAATGCGTTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCAGT 1003 || |||||| || ||||| ||| || ||||| || || ||||| ||| || || Sbjct 13080 GACTCATACTGAAAATGCATTGTTG---TATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1004 TTATGCTACGCTTAAGATTAGAATATATTTTTATGACTCTGTAACGAATTGATATTAATA 1063 ||| ||| | | | | | ||||||||||| |||| | |||| ||| |||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATA--AATA 13194 Query 1064 AAGTTTGAATTTTATATCTGAATATTGGTCTACATACATTGTTTGATTAATTACATTGTA 1123 ||||||||||| || ||||| ||||| || |||||| | |||||||||| | Sbjct 13195 ----TTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAA 13250 Query 1124 CAATACATGTTCAACGGCTTTAATAACTAAATTAATTGAGATTACACCTAGATTGTTGAG 1183 ||||||| || || ||| |||||| ||||| || ||||||| || | Sbjct 13251 TAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAA 13310 Query 1184 ATATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGGT 1243 | |||| | || | ||| ||||| |||||||||| |||||||| |||| Sbjct 13311 AAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACG 13370 Query 1244 CGTCCAGATTCGGAAGGTTAGAAAACACTTGTGCACTCCCAGAGCTTTCCGAGGGTTGTA 1303 |||| ||| |||| | || ||| ||||| | ||| | |||| |||||| Sbjct 13371 AGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTG 13430 Query 1304 GTTGAAT 1310 ||||||| Sbjct 13431 GTTGAAT 13437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8691270880006