Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_012041.1 Length=2757 Score E Sequences producing significant alignments: (Bits) Value seq19028 235 1e-58 >seq19028 Length=31091 Score = 235 bits (260), Expect = 1e-58 Identities = 368/525 (70%), Gaps = 21/525 (4%) Strand=Plus/Plus Query 1609 GCATTCTTTAAAGCCCAATTCTTGAGTGCACTATTTTTCTCTTCATCCAAGAACTCTTTA 1668 ||||| | |||| |||||| || | | | ||||||| || || || | |||||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1669 TAGCTGGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGA 1728 ||||||||| | || || |||||||| | |||||| || || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1729 ACTGGCTTACCGTACTT---CGTGTTTGATTGCCAGTCCTTTTGGGACCCCATGAATTCC 1785 || ||| | ||||| || | || | || ||| | |||||| |||||| || || Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTGCTGGA---CCAATTGCTTTGGGCCCCCATAAACTCT 13971 Query 1786 TTAAAGTGCTTTAAGTAGTGGGGATCGACGTCGTCGATGACGTTATACCATGCATCATTG 1845 ||||||||||||| || || |||||||||| || |||| ||||||||| |||| ||| Sbjct 13972 TTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTT 14031 Query 1846 CTGTAAACCCTAGGACTCAAGTCCAGATGCCCGCGTAAATAGTTGTGTGGGCCTAAAGAC 1905 |||| || | |||| || | ||| |||| || || || ||||| |||||||| Sbjct 14032 GAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGAT 14091 Query 1906 CTAGCCCACATTGTCTTCCCAGTACGACTATCTCCCTCAATTACTATACTTTGAGGTC-T 1964 || |||||| ||||||||| || | | || |||||||| || ||||| | |||| | Sbjct 14092 CTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGT 14151 Query 1965 CAGGGGCCGCGCAGCGGCGTCGACAACATTTTCCGACGCCCACTCTTCAAGTTCTTCTGG 2024 | |||||||||||||| || ||||||||| | ||||| |||| Sbjct 14152 TAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA---------- 14201 Query 2025 AACTTGATTGAAAGAAGAAGAGGAAAAAGGAGAAACATAAGGAGCTGGTGGCTCCTGAAA 2084 ||| ||||| |||||| | ||||||| ||||||||| | || || | || Sbjct 14202 ---TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAA 14257 Query 2085 TATCCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAA 2129 ||| | |||| |||| | || ||||||| |||| | || ||| Sbjct 14258 TATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAA 14302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8710463969914