Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_012118.1 Length=2764 Score E Sequences producing significant alignments: (Bits) Value seq19028 286 6e-74 >seq19028 Length=31091 Score = 286 bits (316), Expect = 6e-74 Identities = 304/400 (76%), Gaps = 1/400 (0%) Strand=Plus/Plus Query 1618 GCATTCTTTAAAGCCCAATTTTTGAGTGCAGAATTCTTCTCTTCGTCCAAGAACTCTTTA 1677 ||||| | |||| ||||||||| | | | ||| || || || || | |||||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1678 TAGCTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGA 1737 ||||| ||| | || || |||||||| | |||||| || || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1738 ACTGGCTTTCCGTATTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTG 1797 || ||| ||||||||||| ||||| ||| | |||||||||||||| || ||||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTA 13974 Query 1798 AAGTGCTTTAGATAATGCGGATCGACGTCATCAATGACGTTGTACCAGGCCTCATTACTG 1857 |||||||||||||||||||||||||||| |||||||| ||| |||||||| | ||| Sbjct 13975 AAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAA 14034 Query 1858 TAGACCTTTGGACTAAGGTCTAAGTGACCACACAAATAATTATGTGGACCCAGTGACCTA 1917 || | || | | | ||||| ||||| || | ||||||||||| || | || || Sbjct 14035 TAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTT 14094 Query 1918 GCCCACATCGTCTTCCCCGTACGACTATCGCCCTCTATGACAATACTTTTAGGTC-TCAA 1976 |||||| |||||||| || | | || ||||| ||||||||||| || |||| | || Sbjct 14095 GCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAA 14154 Query 1977 TGGCCGCGCAGCGGCATCCATCACGTTTTCAGCAGCCCAG 2016 ||||||||||||||||||| | || |||||||| |||||| Sbjct 14155 TGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAG 14194 Score = 138 bits (152), Expect = 2e-29 Identities = 247/360 (69%), Gaps = 3/360 (1%) Strand=Plus/Plus Query 964 GAATCATACTGAGAATGCGTTGATGTTGTATATGGCGTGTACGCACGCCTCTAACCCTGT 1023 || ||||||||| ||||| ||| |||||||| | || || || ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1024 GTATGCTACATTGAAGATACGGATCTACTTCTATGATTCAGTATCGAATTAATAAATATT 1083 ||| ||| ||| | ||| | || || ||||| ||||| |||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1084 AAATTTTATTGAATATGATTGTTCTATATTTACAACATGATGTAATACATTCCATAATAC 1143 ||||||||| || ||| || || || || | | |||||| ||||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1144 ATGATCAACTGCTCTAATTACATTGTTAATACTGATAACTCCTAAATTATCTAAATACTT 1203 || || || |||||||| | |||||||||||| ||||| ||||| |||||| | || Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1204 AAGTACTTGGGTCTTAAAGACCCTTAAGAAACGACCAGTCGGAGGCTGTGAGGTCATCCA 1263 | ||| | ||||| || ||||||||| |||||||| || | ||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1264 GATTCTGAAGGCTAGGAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAA 1323 ||| ||||| |||||| |||||| | || | |||||||||||||| ||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8732855908140