Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_012137.1 Length=2759 Score E Sequences producing significant alignments: (Bits) Value seq19028 259 8e-66 >seq19028 Length=31091 Score = 259 bits (286), Expect = 8e-66 Identities = 288/381 (76%), Gaps = 5/381 (1%) Strand=Plus/Plus Query 1604 TGCATTTTTTAAGGCCCAATTCTTTAATGATGTGTTTTTTCCCTCGTTGAGGAATTCATT 1663 |||||| | || | |||||| |||||| | |||||| |||| | |||||| || || Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1664 ATAACTGCTGTTCGGACCAGGATTGCACAGGAAGATTGTCGGTATCCCGCCTTTAATTTG 1723 ||| ||| | |||||||||||||||| |||||||||||||||||| || || || | Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1724 AACTGGCTTTCCGTATTTTGTGTTGGACTG--CCAGTCTCTTTGGGCCCCCATGAACTCT 1781 || ||| ||||||||||| ||| ||| ||| | |||||||||||||| |||||| Sbjct 13914 TACAGGCCTTCCGTATTTTACCTTG--CTGGACCAATTGCTTTGGGCCCCCATAAACTCT 13971 Query 1782 TTAAAGTGTTTGAGGAAATGCGGGTCGACGTCATCAATGACGTTGTACCAGGCGTCGTTA 1841 |||||||| || || ||||||| ||||||| |||||||| ||| |||||||| | || Sbjct 13972 TTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTT 14031 Query 1842 CTGTATACTTTGGGACTCAGGTCCAGATGTCCGCACAAATAGTTATGTGGTCCCAATGAT 1901 || | ||| | ||| || | ||| ||||| | || ||||||||||| || ||| Sbjct 14032 GAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGAT 14091 Query 1902 CTAGCCCACATCGTCTTCCCCGTTCGACTATCTCCCTCAATTACTATACTCCGAGGTC-T 1960 || |||||| |||||||| |||| | || |||||||| || |||||| |||| | Sbjct 14092 CTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGT 14151 Query 1961 AAGGGGCCGCGCAGCGGCATC 1981 | ||||||||||||||||| Sbjct 14152 TAATGGCCGCGCAGCGGCATC 14172 Score = 96.9 bits (106), Expect = 6e-17 Identities = 240/361 (66%), Gaps = 5/361 (1%) Strand=Plus/Plus Query 951 GAATCATTCTGAGAATGCTTTAATGTTGTATATGGCGTGTACTCACGCCTCTAACCCAGT 1010 || |||| |||| ||||| || ||||||||| | ||||| || ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1011 GTATGCTACCTTGAAGATACGGATCTACTTCTATGATTCCGTGACAAATTAATAAATATT 1070 ||| ||| ||| | ||| | || || ||||| || |||||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1071 GAATTTTA-TTGAAGATGATTGGTCTACAAATACAACATGTTGTAATACATTCCATAATA 1129 |||||||| || | ||| ||| |||| || || | | |||||| |||||| Sbjct 13197 GAATTTTATTTCATGAT-ATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATA 13255 Query 1130 CATGATCAACTGCTCTAACTACATTATTAATACTGACAATTCCTAAGTTATTTAAATATT 1189 ||| || || ||||||| | ||| |||||||| | || ||||| | |||| ||| Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1190 TAAGCACTTGAGTCCTAAAGACCCTTAAGAAACGACCAGTCGGAGGCTGTGAGGTCATCC 1249 | | || || |||| || ||||||||| |||||||| || | ||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1250 AGATTCGGAAAGCTATGAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGA 1309 ||| ||| | |||| |||||| | || | |||||||||||||| |||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1310 A 1310 | Sbjct 13436 A 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8716861666550