Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_012665.1 Length=2743 Score E Sequences producing significant alignments: (Bits) Value seq19028 244 2e-61 >seq19028 Length=31091 Score = 244 bits (270), Expect = 2e-61 Identities = 491/722 (68%), Gaps = 31/722 (4%) Strand=Plus/Plus Query 1598 GCATTCTTGAGAGCCCAGTTTTTTAGTGCGGTGTTCTTTTCCTCGTCCAGGAATTCTTTA 1657 ||||| | | || ||| ||||||| | | || |||||||| || ||||| |||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1658 TAACTGCTGTTGGGACCAGGATTGCATAGGAAGATTGTCGGTATTCCGCCTTTAATTTGA 1717 || ||| | |||||||||||||| | ||||||||||||||| || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1718 ACTGGCTTCCCGTATTTTGTGTTGGACTG--CCAGTCCCTTTGGGCCCCCATGAACTCTT 1775 || ||| | ||||||||| ||| ||| ||| | |||||||||||||| ||||||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTG--CTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1776 TAAAGTGCTTGAGGAAATGCGGATCGACGTCATCAATGACGTTATACCAAGCGTCGTTGC 1835 |||||||||| || ||||||||||||||| |||||||| ||||||||| || | || Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTG 14032 Query 1836 TGTAGACTTTGGGACTTAGGTCTAGATGGCCACACAAATAGTTATGTGGACCTAGTGACC 1895 || | ||| | | | |||| ||| || || | || |||||||| |||| || | Sbjct 14033 AATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATC 14092 Query 1896 TCGCCCACATCGTCTTCCCGGTCCGACTATCTCCCTCAATAACTATACTTTGAGGTC-TC 1954 | |||||| |||||||| || | | || |||||||| || ||||| | |||| | Sbjct 14093 TTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTT 14152 Query 1955 AGGTGCCGCGCAGCGGCGTCGACAACGTTCTCGGACGCCCACTCTTCAAGTTCTTCTGGA 2014 | ||||||||||||| || ||| || || | ||||| |||| Sbjct 14153 AATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA----------- 14201 Query 2015 ACTTGATCGAAAGAAGAAGATAAAAAAGGAGAAACATAAACCTCCAATGGAGGTGTAAAA 2074 ||| | ||| |||||| | ||||||| ||||||| || || || | || Sbjct 14202 --TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAAT 14258 Query 2075 ATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAATACATAATCTTTAGGGGC--TA 2132 || | |||||| || | | || ||||||| |||| ||| | || |||| ||| | Sbjct 14259 ATTCGATCTAATTTTGGAACTATATTATGATATTGAAAT--AGAAACTTTGCTGGCATTT 14316 Query 2133 GTTCCCTAAGTACTCTAAGAGCCTCTGGCTTACTGCCTGT----GTTAAGTGCTGCTGCG 2188 ||| |||| | ||| || ||| | | | ||| |||| ||| |||| Sbjct 14317 TTTCTCTAATAATAGAAAGCGCTTCT---TCAATTGATGTAGCACTTAA-CGCTTCTGCA 14372 Query 2189 TAAGCGTCGTTGGCTGATTGTTGCCCCCCTCTAGCAGATCGTCCGTCGATCTGAAACTCT 2248 | | || || | || ||| || ||||||||||||||||| ||||| ||||| | Sbjct 14373 GATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTG 14432 Query 2249 CCCCATTCAAGGATGTCTCCGTCCTTGTCGATGTAGGACTTGACGTCTGAGCTTGATTTA 2308 ||||| || | || | ||| || ||||||| ||| || ||||| ||||||| Sbjct 14433 CCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTA 14492 Query 2309 GC 2310 || Sbjct 14493 GC 14494 Score = 86.0 bits (94), Expect = 1e-13 Identities = 292/447 (65%), Gaps = 21/447 (5%) Strand=Plus/Plus Query 938 GAATCATTCCGAGAATGCCTTGATGTTGTATATGGCATGTACCCATGCCTCTAATCCTGT 997 || |||| | || ||||| ||| |||||||| | || ||||| ||||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 998 TTACGCTACCCTTAAGATTAGGATCTATTTCTACGATTCTGTAACCAACTGATATTAATA 1057 || ||| | | | | | ||||| || || |||| | | ||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTA------TCAAATTAATA 13190 Query 1058 AAGATCGAATTTTATTTC-TGA-AGTCATATCTACATACATAGTTTGCTCTATCTTTTTC 1115 || || |||||||||||| ||| | || | ||||| || |||||||| || || Sbjct 13191 AATATTGAATTTTATTTCATGATATTC--AAGTACATCCACTGTTTGCTCAATTACATTG 13248 Query 1116 CATAATACATGATTTACAGCCCTAATAATTGAGTTAATTGAAATTACACCCAGATTGTTT 1175 ||||||||| | |||||| |||||||| |||||| ||| ||||| | || | Sbjct 13249 AATAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCT 13308 Query 1176 AGATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCTGAGGGTGTAAG 1235 | | | || | || | ||| ||||| |||||||||| ||| |||| |||| Sbjct 13309 AAAAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAA 13368 Query 1236 GTCGTCCAGATTCGGTATGTCAGAAAACATTTGTGCACTCCCAGAGCTCTCCGAAGGTTG 1295 |||| ||| | | | || ||| |||||| | ||| | ||| |||||| Sbjct 13369 CGAGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTG 13428 Query 1296 TAGTTGAATTGGATCCTTATTGTTATGATGTCCATGTTCATCGTGAATGGACGGT-TGA- 1353 | ||||||| | || |||| || ||||| | | ||| | | | ||| ||| Sbjct 13429 TGGTTGAATCGAATTTGTATTTCGATTATGTC---GGTTGTCG-AATTTGTTGGTCTGAG 13484 Query 1354 --CGTGGTTGAGGATCTTGAAATAAAG 1378 ||||||||||||||||||||| || Sbjct 13485 ATTGTGGTTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8665680093462