Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_013017.1 Length=2386 Score E Sequences producing significant alignments: (Bits) Value seq19028 205 1e-49 >seq19028 Length=31091 Score = 205 bits (226), Expect = 1e-49 Identities = 543/818 (66%), Gaps = 31/818 (4%) Strand=Plus/Plus Query 1297 TTCTTCTCCTCGTCTAAATAGTCTTTATATGAGGAATTTGGACCTGGATTGCAGAGGAAG 1356 || || ||||| || | | |||||||| |||| | ||||| |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1357 ATTGTTGGGATGCCGCCTTTAATTTGAACCGGTTTCCCGTATTTTGTGTTGCTTTGCCAG 1416 ||||| || || || || || || | || || | ||||||||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1417 TCCTTTTGTGCACCCATGAACTCCTTAAAGTGTTTCAGATAATGCGGGTCAACATCATCT 1476 | |||| || ||||| ||||| |||||||| || ||||||||||| || || | ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1477 ATGACGTTATACCATGCGTCATTACTGAACACCTTT--GGGCTCAGATCAAGATGGCCGC 1534 |||| ||||||||| || | ||| |||| | ||| ||| ||| | ||| |||| Sbjct 14008 ATGATGTTATACCAGGCATTATT--TGAATAAATTTTATTATTCAAATCTAAATGACCGC 14065 Query 1535 ACAGATAATTATGAGGCCCAAGACTTCTGGCCCATACGGTCTTCCCTGTTCTGCTTTCTC 1594 | || |||||||| || || | | ||| ||||| | |||||||||||||| || | Sbjct 14066 ATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCAC 14125 Query 1595 CTTCAATCACTATACTAATCGGTC-TACCTGGCCGCGCAGCGGCCTCAACGACGTTCTCC 1653 | ||||| || ||||| | |||| | ||||||||||||||| || || || || Sbjct 14126 CCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCA 14185 Query 1654 GCCGCCCATTCTTCAAGTTCTTCTGGAACTTGGTCGAACGAAGAAGACAAAAAAGGAGAA 1713 || ||||| |||| | || ||| |||||| | ||||||| | Sbjct 14186 GCTGCCCAGCACTCAA--------------TTGTTGAAGGAAGAACAACTAAAAGGACTA 14231 Query 1714 ACATAAGGAGCTGGAGGCTCCTGAAAAATCCTATCTAAATTATTAATTAAATTATGATAT 1773 |||||||| | ||||| | || || | |||||| || || || |||||||||| Sbjct 14232 ACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 1774 TGTAAAACAAAATCTTTG--GGAGCTAACTCCCTTATAACCCTAAGAGCCTCTGTC--TT 1829 || ||| | || ||||| || | || || |||| ||| || ||| || || Sbjct 14292 TG--AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCT-TCAATT 14348 Query 1830 ACTCCCTGCGTTAAGCGCTGCGGCGTAAGCGTCATTGGCTGTCTGTTGGCCTCCTCTGGC 1889 | || | | |||| | || | | ||||| | ||| ||| |||||||| || Sbjct 14349 GAT-GTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGC 14407 Query 1890 AGATCTTCCGTCGATCTGGAATTCTCCCCATTCGAGTGT-GTCTCCATCCTTGTCGATGT 1948 ||||| ||| ||||| || || | ||||| ||| |||| || | || || |||||| Sbjct 14408 AGATCGTCCATCGATTTGAAAATTGCCCCAGTCG-GTGTAATCACAGTCTTTCGCGATGT 14466 Query 1949 AGGACTTGACGTCGGAGCTGGACTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTG-AC 2007 | ||| || || || || ||||| || | |||||| ||| ||||| || Sbjct 14467 ATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTGCTA 14525 Query 2008 CTATTTGGGGAGACCAGGTCGAATAGTCTCTGATTTTGGCACTTGAACTTCCCTTCGAAT 2067 |||| || || | ||||| |||| | ||| | | ||| ||||||||| Sbjct 14526 GTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAAT 14585 Query 2068 TGGAGAAGCACATGCAGATGAGGTTGGCCATCCTCGTG 2105 || | ||| |||| |||| || ||||||| ||| Sbjct 14586 TGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTG 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7523691243936