Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_013019.1 Length=2774 Score E Sequences producing significant alignments: (Bits) Value seq19028 260 2e-66 >seq19028 Length=31091 Score = 260 bits (288), Expect = 2e-66 Identities = 298/399 (75%), Gaps = 1/399 (0%) Strand=Plus/Plus Query 1633 GCATTCTGTAAAGCCCATTTTTTAAGTGCGCTATTTTTCTCTTCATCCAAGAACTCTTTA 1692 ||||| || |||| ||| ||||| | | ||||||| || || || | |||||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1693 TAGCTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGA 1752 ||||| || | || || |||||||| | |||||| || || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1753 ACTGGCTTTCCGTATTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCGATGAATTCCTTA 1812 || ||| |||||||||| ||||| ||| | ||||||||||| || || || ||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTA 13974 Query 1813 AAGTGCTTGAAATAATCCGGATCAACGTCATCAATGACGTTGTACCACGCATCATTATTG 1872 |||||||| | ||||| |||||| |||| |||||||| ||| ||||| |||| ||| Sbjct 13975 AAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAA 14034 Query 1873 TAGACCTTAGGACTAAGGTCAAAGTGACCACACAGGTAATTATGTGGACCCAAAGACCTA 1932 || | ||| | | | || || ||||| || |||||||||||||| || ||||| || Sbjct 14035 TAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTT 14094 Query 1933 GCCCACGTGGTCTTCCCCGTTCTACTATCACCCTCTGTGACAATACGCTTGGGTC-TGAA 1991 |||||| |||||||| |||||| |||||||| ||||||||| |||||||| | || Sbjct 14095 GCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAA 14154 Query 1992 AGTCCGCGCAGCGGCACACACCACTTTCTCAGCAGCCCA 2030 | ||||||||||||| | || || ||||| ||||| Sbjct 14155 TGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Score = 107 bits (118), Expect = 3e-20 Identities = 159/225 (71%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 978 GAATCATTCTGAGAATGCGTTATTGTTGTATATGGCATGTACTCATGCCTCTAACCCAGT 1037 || |||| |||| ||||| |||||||||||| | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1038 GTATGCTACTTTGGAGATACGGATCTATTTCTATGATTCCGTAACAAATTAATAAATATT 1097 ||| |||| || | ||| | ||||| ||||| ||| |||||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1098 AAATGTTATTGAATAAGATTGGTCTACATATACAATATGTTGTAATACATTCCATAATAC 1157 ||| ||||| || | ||| ||||| || | || | | |||||| ||||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1158 ATGATCAACTGCACGATTTACATTATTAATACTGATAATTCCTAA 1202 || || || || | | | | ||| |||||||| |||| ||||| Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAA 13301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8761552764855