Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_013022.2 Length=2791 Score E Sequences producing significant alignments: (Bits) Value seq19028 349 6e-93 >seq19028 Length=31091 Score = 349 bits (386), Expect = 6e-93 Identities = 567/813 (70%), Gaps = 21/813 (3%) Strand=Plus/Plus Query 1713 CCTGGATTGCAGAGGAAGATAGTGGGTATTCCACCTTTAATTTGAACTGGCTTTCCGTAT 1772 || |||||||| | |||||| || ||||| ||||| || || | || ||| |||||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1773 TTACAATTGCTTTGCCAGTCCTTCTGGGCCCCCATGAACTCTTTAAAGTGCTTTAGGTAT 1832 || ||||| ||| | | ||||||||||| |||||||||||||||||||| || Sbjct 13930 TTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAA 13989 Query 1833 TGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTATACACCTTTGGACTC 1892 || || | ||||| |||||||| ||||||||| ||| | || ||| | || | || Sbjct 13990 TGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTC 14049 Query 1893 AGGTCCAAATGCCCACACAGATAATTATGTGGTCCTAAGGATCTAGCCCAAACTGTTTTA 1952 | || ||||| || || || ||||||||||||||||| ||||| ||||| |||| || Sbjct 14050 AAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTC 14109 Query 1953 CCTATTCTACTTGGCCCTTCTATAACTATACTTATGGG-CCTCTCTGGCCGCGCAGCGGC 2011 ||| ||||| || || || || ||||| |||| | | ||||||||||||||| Sbjct 14110 CCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGC 14169 Query 2012 ATCCATGACATTCTCAGCAGCCCAATCGCTGATAATGTCAGGAACATTATTGAAAGAAGA 2071 |||| | ||||| ||||| |||| | | || | ||| ||||| ||||| Sbjct 14170 ATCCCTAACATTTTCAGCTGCCC-AGCACTCA-------------ATTGTTGAAGGAAGA 14215 Query 2072 AATGGAAAAAGGTGAAGAATATACAG--AAGGAGGAGGAGAAAATATCCTATCTAAATTG 2129 | ||||| || || ||| | |||||| || ||||| | |||||| || Sbjct 14216 ACAACTAAAAG--GACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTT 14273 Query 2130 CTAACTAAATTATGATATTGAAATATAAATTTTTCAGGGAGTTTCTCCCTGATTATTTGT 2189 ||||| ||||||||||||||||| ||| ||| | || | ||| || || || || Sbjct 14274 GGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAA 14333 Query 2190 AACGCAGCTTCTTTAGAACCTGCGTTTAATGCCTCTGCGGCAGCGTCGTTAGCAGTCTGC 2249 | ||| |||| | || || |||| || ||||| | | || || | || || Sbjct 14334 AGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGT 14393 Query 2250 TGGCCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCACCCCAGTCGAGGTAGTCTCCG 2309 |||||||||||||||| || ||||| || || | ||||||||| ||| || | | Sbjct 14394 GAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAG 14453 Query 2310 TCCTTCTCGATGTATGACTTGACATCCGAGGAGGACTTAGCTGCCTGGAAATTTGGATGG 2369 || ||| |||||||| ||| ||||| || || || ||||| | ||||| ||||| ||| Sbjct 14454 TCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG 14513 Query 2370 AATTGGGAGGAGTTATGTGGATGTTGTAGGTCGAAATGTCGTGGGTTTTTGAACTCTGCT 2429 || || | ||| ||||| | ||||| |||| |||||| | || | ||| Sbjct 14514 TATGTGGTGCTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCC 14573 Query 2430 TTCCCCTTGAACTGGATGAGAACATGGAGATGCAAAGACCCATCTTGGTGTTTCTCTTGG 2489 || || | ||| || || || ||||| ||| || |||||| |||||||| ||||| Sbjct 14574 TTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGA 14633 Query 2490 CTAACTCTGATAAACAGTTTATCAGACGGGCAA 2522 | ||||| ||||||||||| || || ||| Sbjct 14634 CAGACTCT--AAAACAGTTTATTTGAAGGACAA 14664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8815932610420