Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_013413.1 Length=2751 Score E Sequences producing significant alignments: (Bits) Value seq19028 426 3e-116 >seq19028 Length=31091 Score = 426 bits (472), Expect = 3e-116 Identities = 676/966 (70%), Gaps = 25/966 (3%) Strand=Plus/Plus Query 1640 TAtttttttCTTCTTCCAGATATTCTTTATATGAAGAAGATGGGCCTGGATTGCAGAGGA 1699 |||||||||| || || || | |||||||| |||| || || |||||||| | || Sbjct 13826 TATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGA 13885 Query 1700 AGATAGTGGGAATGCCACCTTTAATTTGAATTGGCTTTCCGTACTTTGTGTTGCTTTGCC 1759 |||| || || || ||||| || || | | ||| ||||||| ||| ||||| || Sbjct 13886 AGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACC 13945 Query 1760 AATCCCTCTGGGCCCCCATGAACTCTTTAAAGTGTTTTAGGTAATGCGGGTCGACGTCAT 1819 ||| || ||||||||||| |||||||||||||| ||||| |||||||| ||||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTAT 14005 Query 1820 CAATGACGTTATACCAAGCATCATTGCAATACACCTTTGGACTAAGATCAAGATGGCCGC 1879 |||||| ||||||||| |||| ||| |||| | || | | | ||| | ||| |||| Sbjct 14006 CAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGC 14065 Query 1880 ACAAGTAATTATGCCTACCAAGAGATCTTGCCCACATGGTTTTACCAGTTCTAGAAGCAC 1939 | | ||||||||| || | ||||||||||||| || || || |||||||| ||| Sbjct 14066 ATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCAC 14125 Query 1940 CTTCAATCACAATACTTATGGG-CCTCCATGGCCGCGCAGCGGCGTCAACAACATTTTCT 1998 | ||||| |||||||| |||| | | |||||||||||||||| || ||||||||| Sbjct 14126 CCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCA 14185 Query 1999 TTTGCCCACTGTTCCAATATATGAGGAACATTATCAAATGAATCTCGACTAAATGGAGTG 2058 |||||| || | | | ||||| ||| | |||||| ||| | Sbjct 14186 GCTGCCCAGCACTCAATTGTTGAAGGAA-----------GAA---CAACTAAAAGGACTA 14231 Query 2059 ACATAAATTTGTTGTTGTGGTTTAAAGAGTTTATCTAGATTTGCATTTAAATTATGAAAT 2118 |||||| || | | || | || | | ||||| |||| | || ||||||| || Sbjct 14232 ACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 2119 TGAAATAGAAAGTCTCTGGGAAGTTTCTCTCTAATGATGTTCAAAGCTTCCCCTTTGGAA 2178 ||||||||||| | | || | ||| |||||||| || | ||||| | | || Sbjct 14292 TGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGAT 14351 Query 2179 GCAGCATTTAAAGCAGCTGCCACAACATCGTTTGCTGCCTGTTGACCTCCTCTAGCAGAT 2238 | |||| |||| || |||| ||||| |||| || ||| |||||||||||||||| Sbjct 14352 GTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGAT 14411 Query 2239 CTTCCATCGATCTGAAAACAACCCCAGTCGAGGTAATCGCCGTCCTTCTGAATGTACGAC 2298 | ||||||||| |||||| ||||||||| |||||| | ||| ||| ||||| | Sbjct 14412 CGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTC 14471 Query 2299 TTGATATCGGACGAAGATCTTGCTCCCTGAAAATTGGGGTGGAATGATCTGCTAGAATTA 2358 || | ||| || || ||| | || || || || |||||| ||| |||||| |||| Sbjct 14472 TTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTA 14531 Query 2359 GGATGGGATATGTCGAAATGTCTTGCATTTCTAAACTTGGCTTTACCTTTGAATTGGACC 2418 |||||| || ||||| ||||| | |||||||| | || || |||| |||||| | Sbjct 14532 GGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATA 14591 Query 2419 AAAGCATGGATGTGCAGAGACCCATCTTGGTGTTTTTCCTGTGAAACCCTAACGAAGAGT 2478 | |||||| | || | |||||| ||||||||||| || | || |||| || ||| Sbjct 14592 AGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCTAA--AACAGT 14649 Query 2479 TTCTCGGAAGGGCATGAAA--TGCCTAGGGTCTTCTCCAGAACAGTT--TCTTTAGACAG 2534 || | ||||| || |||| || | || ||| || | || ||||||| || Sbjct 14650 TTATTTGAAGGACAAGAAACCTGTTTCAAGTGCTCT----AAGATTTGATCTTTAGGAAG 14705 Query 2535 ACTACACTGGGGATATGTGAGAAATATATTCTTAGCATTAACACAGAAAGAAGGATGACG 2594 | ||| | ||| |||| |||||||| || |||| ||| || ||| ||| || | | Sbjct 14706 AGGACATTTTGGAAATGTAAGAAATATGTTTTTAGAATTTACCTGGAATGAATGAAGCCT 14765 Query 2595 TGGCAT 2600 |||||| Sbjct 14766 TGGCAT 14771 Score = 181 bits (200), Expect = 2e-42 Identities = 308/438 (70%), Gaps = 15/438 (3%) Strand=Plus/Plus Query 955 TCACACGGAGAATGCTTTGTTATTGTACATGGCATGTACTCATGCCTCTAATCCTGTGTA 1014 ||| || || ||||| ||||| ||| || | |||||||| ||||||||||| || Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1015 TGCTACATTGAAGATACGCATATATTTCTATGACAATGTAACAAATTAATATAAATTGAA 1074 | ||| ||| | ||||| ||||| ||||| | |||| |||||||||| | |||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1075 TTTTATTATATGAAG--CATGTCTACATACATGGTCTCCTCTATTACATTCCATAAGACA 1132 ||||||| |||| || || |||| || || | ||| |||||||| |||| ||| Sbjct 13200 TTTTATTTCATGATATTCAAGT--ACATCCACTGTTTGCTCAATTACATTGAATAATACA 13257 Query 1133 TGATTAACTGCTCTAATAACATTATT--TACTGATACAACACCCAAACTATTCAGAAATT 1190 | | || |||||||||| ||| || |||| ||| ||||| || | | | ||||| Sbjct 13258 TTGTCTACAGCTCTAATAATATTGTTAATACTAATA--ACACCTAATCGGTCTAAAAATT 13315 Query 1191 TACATACATGATATTTAAATACTCTTAAAAAATGCCAAGTCAGAGGTCGTAAACGAGTCC 1250 | |||| || |||||||||||||||| ||| | ||| |||| ||||||||||||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1251 AAATGCGGAAGATTAAAAAACATCTGTGAATCCCCAGAGCTCTCCTGAGGTTGTGATTGA 1310 || |||| | | ||| | |||||| ||| | |||| |||||||| |||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1311 ACTGGATCTGCATTTCTATGTAGTCCCAGTTGTTG--TTGAACGATCTGGTTTTGTGCTT 1368 | | || || ||||| || || | | ||||| | || | |||| ||||| || Sbjct 13436 ATCGAATTTGTATTTCGAT-TA-TGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGGTT 13493 Query 1369 CAGCACCTTGAAATAGAG 1386 || | ||||||||| || Sbjct 13494 GAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8691270880006