Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_013414.1 Length=2733 Score E Sequences producing significant alignments: (Bits) Value seq19028 224 2e-55 >seq19028 Length=31091 Score = 224 bits (248), Expect = 2e-55 Identities = 302/419 (72%), Gaps = 1/419 (0%) Strand=Plus/Plus Query 1591 GAAGAATGGTTCTTTGATGGTGTAGAATTCCGCATTCTTTAAAGCCCACAATTTGAGCGA 1650 ||| ||||||| | |||||||||||||||| ||||| | |||| ||| ||| | Sbjct 13764 GAATAATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTT 13823 Query 1651 CGCATTTTGTTCCTCGTCGAGGAACTCTTTATATGACGATTTCGGTCCTTGATTACAGAG 1710 ||||| |||||| ||||||||||||||||| || | || || |||| || | Sbjct 13824 AATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAA 13883 Query 1711 AAAGATGGTGGGGATACCACCTTTAATTTGTGTGGGCTTTCCGTATTTGACGTTACTTTG 1770 ||||| || || || ||||| || || | | ||| |||||||||| || || || Sbjct 13884 GAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGA 13943 Query 1771 CCAGTCACGTTGTGCGCCCATGAATTCTTTGAAATGTTTCAAATAATGCGGATCGACGTC 1830 ||| | | ||| || ||||| || ||||| || || || | ||||||||||||||||| Sbjct 13944 CCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTT 14003 Query 1831 ATCAATGACGTTATACCATGCATCGTTGGAATACACTTTCGGACTAAGGTCCAAATGGCC 1890 |||||||| ||||||||| |||| || ||||| | ||| | | | || ||||| || Sbjct 14004 ATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACC 14063 Query 1891 GCAAAGATAATTGTGCGGCCCTAATGCACGAGCCCATGTCGTCTTACCAGTACGACTATC 1950 ||| || ||||| || || ||||| | | ||||| ||||| || || | | || Sbjct 14064 GCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTC 14123 Query 1951 TCCTTCAATGACTATACTAATAGGTC-TCTCCGGCCGCGCAGCGGCATCCTTCACATTT 2008 || |||||||| ||||| | |||| | |||||||||||||||||| | |||||| Sbjct 14124 ACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTT 14182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8633691610282