Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_013640.2 Length=2823 Score E Sequences producing significant alignments: (Bits) Value seq19028 174 3e-40 >seq19028 Length=31091 Score = 174 bits (192), Expect = 3e-40 Identities = 239/328 (73%), Gaps = 7/328 (2%) Strand=Plus/Plus Query 1765 CCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTTCCGTAT 1824 || |||||||| | |||||| || || || || || || || | || ||| |||||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1825 TT-ACAGT--TGGATTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGG 1881 || || | |||| | | | ||| ||||||||||| || || |||||||||||||| Sbjct 13930 TTTACCTTGCTGGAC--CAATTGCTT-TGGGCCCCCATAAACTCTTTAAAGTGCTTTAGA 13986 Query 1882 TATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTAAACTTTTGGG 1941 || || || | ||||| |||||||| ||||||||| ||| | || |||| ||| Sbjct 13987 TAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTA 14046 Query 1942 CTTAAATCTAAATGCCCACACAAGTAATTGTGAGGGCCCAAAGACCTGGCCCATACTGTT 2001 | ||||||||||| || || | |||||| || || || ||||| || ||||| |||| Sbjct 14047 TTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTC 14106 Query 2002 TTTCCTATTCTGCTTGGGCCTTCAATAACAATGGATATGGGTC-TATCCGGCCGCGCAGC 2060 || ||| |||| || ||||| ||||| |||||| | ||||||||||| Sbjct 14107 TTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGC 14166 Query 2061 GGAATCCATGACATTTTCAGCGGCCCAG 2088 || |||| | ||||||||||| |||||| Sbjct 14167 GGCATCCCTAACATTTTCAGCTGCCCAG 14194 Score = 78.8 bits (86), Expect = 2e-11 Identities = 157/230 (68%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 2172 ATCTAAATTAGAAACTAAATTATGATATTGAAATAAAAATTTTTCAGGAAGTTTCTCCCT 2231 |||||| || | ||||| ||||||||||||||||| ||| ||| | || | ||| || || Sbjct 14264 ATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCT 14323 Query 2232 GATTATTTGCAACGCAGTTTCTTTAGAACCTGCGTTTAGAGCCTCTGCGGCTGCGTCATT 2291 || || | ||| ||| | || || ||| || ||||| | | | ||||| Sbjct 14324 AATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATT 14383 Query 2292 AGCAGTCTGCTGACCTCCTCTAGCAAATCTGCCGTCGATCTGGAATTCACCCCATGTGAG 2351 | || || ||||||||||||| ||| || ||||| || || | ||||| || | Sbjct 14384 TGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCA-GTCGG 14442 Query 2352 GGT-ATCCCCGTCCTTGTCAACGTAGGACTTGACATCGGACGAGGATTTA 2400 || ||| | ||| || | | ||| ||| ||||| || || |||||| Sbjct 14443 TGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTA 14492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8918294672660