Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014066.1 Length=2612 Score E Sequences producing significant alignments: (Bits) Value seq19028 141 2e-30 >seq19028 Length=31091 Score = 141 bits (156), Expect = 2e-30 Identities = 248/356 (70%), Gaps = 14/356 (4%) Strand=Plus/Plus Query 1510 TTTTCCTCTTTGTCGAGGAAATCTTTATAGCTTGCACCCTCACCTGGATTGCAAAGCACG 1569 |||||||| | ||||||| ||||||||||| | | ||| |||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1570 ATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTTGACTG--CC 1627 |||| || || || || || || | || ||| | |||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTT-TACCTTG-CTGGACC 13945 Query 1628 AATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGA 1687 ||| |||||||||| || || ||||| ||| |||||||||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGT------GCTTTAGATAATGCGGATCGA 13999 Query 1688 CGTCGTCAATGACGTTATACTCCACTTCGTTTGAATAGACTCGTGGGTTGAAGTCCAGGT 1747 ||| ||||||| ||||||| | | |||||||| | | || || || | | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1748 GTCCACTGAGGTAGTTATGTGGGCCTAGCGCACGTGCCCACATTGTCTTTCCGGTCCTCG 1807 | || | ||||| |||||||| |||| | | ||||||| |||||| || || || | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1808 AATCACCTTCAACGATGATACTAACTGGTCTCTCA-GGCCGCGCAGCGGGATCCCT 1862 | ||||| |||| || ||||| |||| | | ||||||||||||| |||||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Score = 78.8 bits (86), Expect = 2e-11 Identities = 101/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 1289 TAGACGCCATTC-TCGCTCTGAGGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGAC 1347 |||||||||||| ||||| || | ||||||||| ||||||||||||| ||||||||| Sbjct 13554 TAGACGCCATTCATCGCT-TGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGAC 13612 Query 1348 CCGTACAGCCTATGTGTAAGTATATGGAGCACCCGCACTCCAGATCAATCCGCCTCCTCC 1407 | | ||||| || | | | |||| || || || || ||| || | || || || | Sbjct 13613 CAGAACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTC 13672 Query 1408 TGATGGCTCTCCTCTTG 1424 |||| |||| ||||| Sbjct 13673 TGATTTGTCTCTTCTTG 13689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8246630963804