Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014140.1 Length=2768 Score E Sequences producing significant alignments: (Bits) Value seq19028 199 7e-48 >seq19028 Length=31091 Score = 199 bits (220), Expect = 7e-48 Identities = 258/350 (74%), Gaps = 11/350 (3%) Strand=Plus/Plus Query 1675 TCTTTATAGGAAGATCTGGGGCCAGGATTGCAGAGGAAAATTGTTGGTATTCCA-CCTTT 1733 ||||||||| || | || ||||||||||| | ||| ||||| ||||| ||| ||||| Sbjct 13849 TCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTT 13908 Query 1734 AATTTGAGTGGGCTTGCCGTACTTCACGTTGCTTTGCCAGTCTCTTTGGGACCCCATGAA 1793 | || | || ||| ||||| || || ||||| ||| | ||||||| |||||| || Sbjct 13909 ATCTTTACAGGCCTT-CCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAA 13967 Query 1794 TTCTTTCATATGCTTTAGATAGTGGGGATCTACGTCATCGATGACGTTGTACCAGGCATC 1853 ||||| | ||||||||||| || ||||| |||| ||| |||| ||| |||||||||| Sbjct 13968 CTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATT 14027 Query 1854 GTTTGAATAGACCTTGGCGCTGAGATCTAAATGACCACATAGGTAATTGTG----CCTAC 1909 |||||||| | || | | |||||||||||| ||||||||||| || |||| Sbjct 14028 ATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTA- 14086 Query 1910 CAAGGCTTCTGGCCCACATCGTCTTCCCCGTCCTGGATTCACCTTCCAGGACGATGCTTA 1969 ||| ||| |||||| |||||||| || || || ||||| || | ||| || || Sbjct 14087 -AAG--ATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCT 14143 Query 1970 TGGGTC-TCATCGGCCGCGCAGCGGAAGCTTTCACATTATCTGATGCCCA 2018 |||||| | | ||||||||||||| | | | ||||| || | |||||| Sbjct 14144 TGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Score = 80.6 bits (88), Expect = 5e-12 Identities = 158/231 (68%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 2234 AACCTCCTCTGGCACTTCGACCATCAATCTGGAAAGACCCCCATTGTATGGTGTCTCCGT 2293 |||||||||| ||| ||| ||||| || || ||| ||||| | || || | || Sbjct 14395 AACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGT 14454 Query 2294 CTTTGTCGATGTATGTTTTGACGTCCGAACTTGATTTAGCTCCCTGAATGTTCGGATGGA 2353 |||| |||||||| | || || || ||| ||||||||| || | ||| || ||| Sbjct 14455 CTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGT 14514 Query 2354 AATGTGTTGACCTTCTTGGGGAAG-TGAGGTCGAAGTGTCTTTCGTTCGTAATTTGACAC 2412 | |||| || | || || | ||| ||||||||||| ||| ||| ||| | Sbjct 14515 A-TGTGGTGCTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCC 14573 Query 2413 TTTCCTTCAAACTGGATAAGCACATGGAGATGTGGTTCCCCATTCTCGTGT 2463 || ||||| || || ||||| ||||| ||| |||||||| || |||| Sbjct 14574 TTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGT 14624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8742359878185