Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014141.1 Length=2708 Score E Sequences producing significant alignments: (Bits) Value seq19028 187 4e-44 >seq19028 Length=31091 Score = 187 bits (206), Expect = 4e-44 Identities = 233/315 (74%), Gaps = 7/315 (2%) Strand=Plus/Plus Query 1651 CCCGGGTTGCATAAAAAGATGGTGGGAATTCCCCCTTTAATTTGAATCGGTTTACCGTAT 1710 || || ||||| || ||||| || || || || || || || | | || | |||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1711 TTCGTGTTGCTCTGCCAATCATGCT--GGGCCCCCATGAATTCCTTGAAGTGCTTTAGGT 1768 || ||||| ||||| |||| |||||||||| || || || ||||||||||| | Sbjct 13930 TTTACCTTGCTGGACCAAT--TGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT 13987 Query 1769 AGTGCGGATCTACGTCATCGATGACGTTGTACCATGCATTATTGCTGTACACCTTTGGAC 1828 | |||||||| |||| ||| |||| ||| ||||| |||||||| || | || | Sbjct 13988 AATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTAT 14047 Query 1829 TCAGGTCTAGATGACCACATAGGTAATTGTGTACCCCCAAAGACCGCGCCCACATCGTCT 1888 ||| |||| |||||| ||||||||||| ||| || ||||| | |||||| |||| Sbjct 14048 TCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCT 14107 Query 1889 TCCCCGTTCTGGAATCACCTTCAACGACGATACTCATGGGTCTGTTA--GGCCGCGCAGC 1946 |||| ||||| || ||||| |||| ||| |||||| |||||| |||| ||||||||||| Sbjct 14108 TCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTC-GTTAATGGCCGCGCAGC 14166 Query 1947 GGGATCTTTCACATT 1961 || ||| | ||||| Sbjct 14167 GGCATCCCTAACATT 14181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8553720402332