Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014446.1 Length=2608 Score E Sequences producing significant alignments: (Bits) Value seq19028 150 3e-33 >seq19028 Length=31091 Score = 150 bits (166), Expect = 3e-33 Identities = 262/376 (70%), Gaps = 15/376 (4%) Strand=Plus/Plus Query 1498 TTTTCCTCTTTGGCTAGGAAATCTTTATAGCTAGCACCCTCACCAGGATTGCAAAGCACG 1557 |||||||| | | ||||| ||||||||||| | | |||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1558 ATTGCTGGGATCCCGCCTTTAATTTGAACTGGCTTGCCGTACTTGCAATTTGATTG-CCA 1616 |||| || ||||| || || || | || ||| | ||||| || | ||| | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCA 13946 Query 1617 GTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAACTTTAGATATTGCGGTGCGAC 1676 | | |||||||||| || ||||| ||||||||| |||| ||||| |||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTA------GATAATGCGGATCGAC 14000 Query 1677 GTCATCAATGACGTTATACTCCACGTCATTTGAAAATACTCGAGGGTTGAAGTCCAGATG 1736 || |||||||| ||||||| | | ||||||| | | | | || || || | ||| Sbjct 14001 GTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATG 14060 Query 1737 TCCACTAAGATAATTATGTGGGCCTAACGAACGAGCCCACATCGTCTTCCCTGTCCTCGA 1796 || | || ||||||||||| ||||| || | |||||| ||||||||||| || || Sbjct 14061 ACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGA 14120 Query 1797 GTCACCTTCTACTATGATACTCATAGGTC-TCTCCGGCCGCGCAGCGGCACCTCTTCCAA 1855 ||||| || | | |||||| | |||| | ||||||||||||||| | || || Sbjct 14121 CTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---AA 14177 Query 1856 AATTCTCATCGGCCCA 1871 ||| ||| | ||||| Sbjct 14178 CATTTTCAGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8233835570532