Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014510.2 Length=2591 Score E Sequences producing significant alignments: (Bits) Value seq19028 140 5e-30 >seq19028 Length=31091 Score = 140 bits (154), Expect = 5e-30 Identities = 249/359 (69%), Gaps = 12/359 (3%) Strand=Plus/Plus Query 1492 TTTTCCTCTTTCTCAAGGAAGTCTTTATAGCTCTGTCCCTCTCCTGGATTGCAGAGCACG 1551 |||||||| ||| ||||| ||||||||||| || |||||||| | | | Sbjct 13831 TTTTCCTC---CTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1552 ATAGAGGGTATGCCACCTTTAATTTGAATTGGCTTTCCGTATTTACAGTTTGATTG-CCA 1610 || | ||||| ||||| || || | | ||| |||||||||| | ||| | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCA 13946 Query 1611 ATCTTTCTGGGCCCCTATCAGCTCTTTCCAATGTTTCATCTTTAAATATTGCGGACTGAC 1670 || | |||||||| || | |||||| | || ||||| ||| |||||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGAC 14000 Query 1671 GTCATCAATGACGTTATAGTCCGCTCCATTTGAATAAACTTTGGAATTAAAATCCAGGTG 1730 || |||||||| |||||| || ||||||||||| ||| ||| ||||| | || Sbjct 14001 GTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATG 14060 Query 1731 TCCACTCAGATAATTATGTGGGCCTAGTGCACGAGCCCACATAGTCTTACCTGTCCTTGA 1790 || | || ||||||||||| |||| | | |||||| ||||| ||||| || || Sbjct 14061 ACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGA 14120 Query 1791 ACATCCCTCTATTATTATACTGATAGGTC-TTTCTGGCCGCGCAGCGGCACCCCTACCA 1848 ||||| || | ||||| | |||| || |||||||||||||||| ||||| || Sbjct 14121 CTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACA 14179 Score = 107 bits (118), Expect = 3e-20 Identities = 237/346 (68%), Gaps = 31/346 (9%) Strand=Plus/Plus Query 860 ACTCATGCCTCTAACCCTGTGTATGCTACGTTGAAAATACGTAGCTATTTTTATGATTCA 919 |||||||| ||||| ||||| ||| ||| ||| || ||| || ||||||||||| Sbjct 13117 ACTCATGCATCTAATCCTGTATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGT 13176 Query 920 ATAACAAATTAATAAAGTTTAATTTTTATTGAATGATTCTCAAGTACA------------ 967 || |||||||||||| || | ||||||| ||||| ||||||||| Sbjct 13177 GTATCAAATTAATAAATATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGC 13236 Query 968 TGATTTACATATGGTTTATCTGTTGCAAATCGAACAGATCTAATTACATTGTtaatagaa 1027 | | |||||| || | || ||| || |||| |||||| | |||||||||| | Sbjct 13237 TCAATTACAT-TGAATAATACATTG----TC-TACAGCTCTAATAATATTGTTAATACTA 13290 Query 1028 ataactcctaaattatct--aaataaaataaaactaaatgtctaaat-ctattta-aata 1083 ||||| ||||| ||| |||| || | || ||| | ||||| || || | || | Sbjct 13291 ATAACACCTAATCGGTCTAAAAATTTCATTACACGAAA--TTTAAATACTCTTAAGAAAA 13348 Query 1084 TGT-CGTCCCAGAAGCTTGAACTGATGTCGTCCAGACTTGGAAGTTCAAGAAGGCTTTGT 1142 || ||| || | | | ||| || |||| || | |||||| | ||| ||||||| Sbjct 13349 CGTATGTCGGAGGA-CGTAAAC-GA----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGT 13402 Query 1143 GTAGTTGAAGCGACTTCCTCAGGTTGTGGTTGAACCGTATTTGGAT 1188 | || | || ||||||||||||||||||||| || ||||| || Sbjct 13403 GAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGAATTTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8179455149126