Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014542.1 Length=2763 Score E Sequences producing significant alignments: (Bits) Value seq19028 407 3e-110 >seq19028 Length=31091 Score = 407 bits (450), Expect = 3e-110 Identities = 676/972 (70%), Gaps = 21/972 (2%) Strand=Plus/Plus Query 1629 TGCATTCTTGAGAGCCCAATTTTTTAATGATATGtttttttCTTCGTCTAGATATTCCTT 1688 |||||| | | || ||||||||||||| || |||||||| || || || | || || Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1689 ATATGATGAGGTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATACC-CCCTTTAATTT 1747 ||| || ||||| || |||||||| | |||||| || || || || ||||||| || Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1748 GAATGGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCCT 1807 | || ||||| ||| ||| ||||| ||| | || ||||||||||| || || | Sbjct 13914 TACAGGCCTTCC-GTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1808 TGAAGTGCTTTAAATAATGCGGGTCTACGTCATCAATGACGTTGTACCACGCATCAGTAC 1867 | |||||||||| ||||||||| || |||| |||||||| ||| ||||| |||| | | Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTG 14032 Query 1868 TGTACACCTTTGGACTTAGGTCTAAATGGCCACACAAATAATTATGTGGGCCTAGAGACC 1927 || | || | | | |||||||| || || | ||||||||||| |||| ||| | Sbjct 14033 AATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATC 14092 Query 1928 TGGCCCACATTGTTTTGCCGGTCCTGCTATCACCCTCGATGATAATACTATTAGGTC-TC 1986 | |||||| ||| || || || || |||||||| |||| |||||| || |||| | Sbjct 14093 TTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTT 14152 Query 1987 CATGGCCGCGCAGCGGAAGACATGACGTTCTCGGACACCCAGACTTCAAGTTCCTCAGGA 2046 ||||||||||||||| | | | || || || | ||||| |||| | Sbjct 14153 AATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAATT--------- 14203 Query 2047 ACTTGGTTAAAAGAAGAAGATAAAAAAGGAGAAATATAAGGAGCCGGTGGCTCCTGAAAA 2106 ||| || |||||| | ||||||| || |||||| | || || | || Sbjct 14204 -----GTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAAT 14258 Query 2107 ATCCTATCTAAATTACATTTTAAATTATGATATTGAAAAATAAAATCTTTTGGGAGTTTT 2166 || | |||||| || || ||||||||||||||| | ||| | | ||| | |||| Sbjct 14259 ATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTT 14318 Query 2167 TCCCTTATTATTGATAAAGCCTCTTCCGCCGAACATGCATTTAGGGCCTCTGCTGCTGCA 2226 || || || || || | || ||||| || ||| ||| || ||||| | | || Sbjct 14319 TCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACA 14378 Query 2227 TCATTAGCTGTCTGTTGACCTCCTCGAGCAGATCTTCCATCGATCTGAAACTGACCCCAG 2286 ||||| | ||| ||| |||||||| |||||||| ||||||||| ||||| | |||||| Sbjct 14379 TCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAG 14438 Query 2287 TCGATGTAATCACCGTTCTTCTCGATGTAGGACTTGACATCGGAGCTGGACTTTGCTCCC 2346 ||| ||||||||| || ||| ||||||| ||| ||||| || || || || Sbjct 14439 TCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGAT 14498 Query 2347 TGGAAGTTTGGGTGGAATTGGGAGGAGTTATTAGGGTGAGTGACATCGAAATGTCTGGGG 2406 ||||||||||||||| || || | ||||||| || ||| |||||| ||||| ||| Sbjct 14499 TGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAGGATGGATGATATCGAAGTGTCTAGGG 14558 Query 2407 TTTCTGAACTTGGCTTTACCTTTGAACTGGATGAGGGCGTGGATATGCAGAGACCCATCT 2466 ||||| || | || || |||| ||| || || ||||| ||| |||| | |||||| Sbjct 14559 TTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCC 14618 Query 2467 TGGTGTTTTTCTCGTGACACTCTGATAAATAATTTATCAGATGGGCAATTTA-TTGACTG 2525 |||||||||||| ||||| || ||| | ||||| || || ||| | || | Sbjct 14619 TGGTGTTTTTCT--TGACAGACTCTAAAACAGTTTATTTGAAGGACAAGAAACCTGTTTC 14676 Query 2526 AAGAATTTCGAGCATTTGCTCTTTGGGTATTGGGCATTTTGGATAAGTGAGGAAAATATT 2585 ||| || | ||||| ||||| || | || ||||||||| | || || || || || Sbjct 14677 AAG-TGCTCTAAGATTTGATCTTTAGGAAGAGGACATTTTGGAAATGTAAGAAATATGTT 14735 Query 2586 TTTGGTATTTAC 2597 ||| | |||||| Sbjct 14736 TTTAGAATTTAC 14747 Score = 201 bits (222), Expect = 2e-48 Identities = 365/533 (68%), Gaps = 27/533 (5%) Strand=Plus/Plus Query 977 CATACTGAAAACGCCTTGTTATTGTATATGGCCTGTACTCATGCCTCTAATCCAGTGTAT 1036 ||||||||||| || ||||| |||||| | |||||||| |||||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1037 GCAACTATGAAAATACGCATCTATTTCTATGATTCAATATCAAATTAATAAAATTTATAT 1096 ||||||| || ||||| ||||| ||||| ||||||||||||||| || || Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1097 TTGATATCATGACTTTCTGTTACATTTATTGTGTTTTCAAGTACATCATACAATACATGA 1156 || || |||||| ||| ||||| | ||| | |||| ||||| | ||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1157 TCAACTGCTCTGATTACATTGTTAATGGAAATTACTCCAAGACTATCTAAATACTTAAGA 1216 || || ||||| || | ||||||||| ||| || || | | |||||| | || | Sbjct 13261 TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATT 13320 Query 1217 ACTTGATATCTAAATACTCTTAAGAAACGACCAGTCTGAGGCCGTAAGGTCGTCCAGATT 1276 || || || ||||||||||||||||| ||| |||| ||||| |||| ||| Sbjct 13321 ACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGATC 13380 Query 1277 CGGAAGTTGAGAAAACATTTGTGAATCCCCAGTACCTTCCTGATATTGTGATTGAATCTT 1336 ||||||||| ||| |||||||| |||| ||||||| | ||||| ||||||| Sbjct 13381 TTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGA 13440 Query 1337 ATCTGAATGGAAATGATGTCG--TGGCTCATTAGAAATGGCCTCTCGTCGTGGTTGGTGA 1394 || || || || |||||| || | ||| | ||| || | ||||||| || Sbjct 13441 ATTTGTATTTCGATTATGTCGGTTGTCGAATTTG--TTGGTCTGAGATTGTGGTTGAGGA 13498 Query 1395 TCTTGAAATACAG-GGGATTTTCTATCTCCCATATA------------AAA-------AC 1434 |||||||||| || | | ||| ||||| ||| ||| || Sbjct 13499 TCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAGAC 13558 Query 1435 GCCATTCTGGGCTTGATGAGCAGTGATGAGTTCCCCGGTGCGTGAATCCATGA 1487 ||||||| ||||| |||||||||||| |||||| |||||| |||||||| Sbjct 13559 GCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGA 13611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8729657059822