Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014645.1 Length=2792 Score E Sequences producing significant alignments: (Bits) Value seq19028 250 4e-63 >seq19028 Length=31091 Score = 250 bits (276), Expect = 4e-63 Identities = 550/817 (67%), Gaps = 27/817 (3%) Strand=Plus/Plus Query 1675 ATTCTTTTCCTCTTCCAGATATTCCTTATATGATGATGTCGGTCCTTGATTGCAGAGGAA 1734 ||| |||||||| || || | || ||||| || || || || ||||||| | ||| Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1735 GATAGTGGGAATTCCACCTTTAATTTGAATGGGCTTCCCGTACTTGGTGTTGCTTCGCCA 1794 ||| || || || ||||| || || | | ||| | ||||| || ||||| ||| Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCA 13946 Query 1795 GTCTCTTTGGGCCCCCATAAACTCTTTAAAGTGTTTTAGATAGTGGGGATCTACGTCATC 1854 | ||||||||||||||||||||||||||||| |||||||| || ||||| |||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1855 AATGACGTTATACCAAGCATCATTTGAATACACCTTTGGGCTTAGATCAAGATGACCACA 1914 ||||| ||||||||| |||| ||||||||| | || | | ||| | |||||| || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1915 CAAATAGTTGTGTGGACCTAATGACCTGGCCCACATGGTCTTGCCTGTTCTACTATCACC 1974 | || || ||||| ||||| || || |||||| ||||| ||||||||| ||||| Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1975 CTCAATAACAATACTAATCGGTC-TCCAAGGCCGCGCAGCGGCAGCACACACGTTCTCAG 2033 |||||| |||||||| | |||| | | ||||||||||||||| | | || || |||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAG 14186 Query 2034 AAACCCACTCTTCAAGTTCTTCCGGAACTTGATCAAAAGAAGAAGATAAAAAAGGAGAAA 2093 |||| |||| ||| | || |||||| | ||||||| || Sbjct 14187 CTGCCCAGCACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTAA 14232 Query 2094 TATACACTTCAGGCGGAGCCTGAAAAATCCTATCTAAATTACTGTTTAAATTATGAAAAC 2153 ||| |||||| || | | || || | |||||| || || ||||||| | Sbjct 14233 CATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATT 14292 Query 2154 CATAAACAAAATCTCTAGGAGCTAGTTCCTTAAGTATATTAAGAGCCTCTTGTTTACTTC 2213 | | | ||| | | || | ||| ||| ||| ||| | ||| || | || Sbjct 14293 GAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAG---CGCTTCTTCAATTG 14349 Query 2214 CTG----AGTTAATTGCTCCGGCGTAAGCATCATTGGCTGTTTGTTGGCCTCCTCTTGCA 2269 || | |||| ||| | || | ||||||| | ||| ||| |||||||| ||| Sbjct 14350 ATGTAGCACTTAA-CGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCA 14408 Query 2270 GATCTTGCATCGATTTGAAATTCTCCCCATTCGAGGGTGTCGCCGTCCTTGTCGATGTAG 2329 |||| | ||||||||||||| | ||||| ||| | || | ||| || ||||||| Sbjct 14409 GATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTAT 14468 Query 2330 GACTTGACATCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTG-ACCT 2388 ||| ||||| || |||||||| || | ||| || ||| ||||| || | Sbjct 14469 TTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTGCTAGT 14527 Query 2389 GTTAGGGGATATGAGGTCGAAGAATCGCTGATTCTGGCACTTGT-ACTTCCCTTCGAATT 2447 ||||| |||| |||||| || | || | | |||| ||| |||||||||| Sbjct 14528 ATTAGGATGGATGATATCGAAGTGTCTAGGGTT-TCTAAATTGTGCCTTGCCTTCGAATT 14586 Query 2448 GCATAAGCACATGGAGATGAGGTTCGCCATTCTCGTG 2484 | ||||| ||||| |||| ||| |||| || ||| Sbjct 14587 GAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTG 14623 Score = 221 bits (244), Expect = 2e-54 Identities = 384/556 (69%), Gaps = 27/556 (5%) Strand=Plus/Plus Query 990 CATACTGAGAATGCTTTGTTGTTGTATATGGCTTGTACTCATGCCTCTAACCCTGTGTAT 1049 |||||||| ||||| |||| ||||||| || |||||||| ||||| ||||| ||| Sbjct 13084 CATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1050 GCTACTCTGAAAATACGCATCTATTTCTACGATGCAGTTACGAATTAATAAATATTAAAT 1109 |||| ||| || ||||| ||||| || || || | |||||||||||||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1110 TTTATTTCATGTGCTTCTAATACATTGCTTGTACCTTCAAGTACGTTGTACAATACATGA 1169 ||||||||||| ||| | ||||| ||| |||| ||| ||| | ||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1170 TCAACTGCTCTAATAATTGCATTAATTGAAATTACACCCAAATTATCTAAATACTTTAAC 1229 || || ||||||||||| ||||| ||| ||||| || |||||| | || | Sbjct 13261 TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATT 13320 Query 1230 ACTTGAACCCTAAATACCCTTAAGAAACGACCAGTCTGAGGGCGTAAGCTCGTCCAGACT 1289 || ||| ||||||| ||||||||| ||| |||| ||||| | |||| || Sbjct 13321 ACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGATC 13380 Query 1290 TTGAAGTTCAGAAAACACTTGTGAATCCCCAACGCCTTCCGCAGGTTGTGGTTGAACCTG 1349 |||||||| || ||| ||||||| || |||||| ||||||||||||||| | Sbjct 13381 TTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGA 13440 Query 1350 ATTTGTACTGTTATTATGTCGTGTTG--GTAGTTGAACGGTCTCTCGTCGTGGTTGGTTA 1407 ||||||| | ||||||||| |||| | | ||| ||||| | ||||||| | Sbjct 13441 ATTTGTATTTCGATTATGTCG-GTTGTCGAATTTG-TTGGTCTGAGATTGTGGTTGAGGA 13498 Query 1408 TCTTGAAATACAG-GGGATTTTGTATCTCCCAGATA------------AAA-------AC 1447 |||||||||| || | | ||| ||||| ||| ||| || Sbjct 13499 TCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAGAC 13558 Query 1448 GCCATTCCAAGCTTGATGCGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGATTACTGC 1507 ||||||| ||||| || ||||||||| ||||||||||||| |||||||| | | Sbjct 13559 GCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAGAAC 13618 Query 1508 AGTTAATATGTATGAA 1523 || |||||| | |||| Sbjct 13619 AGCTAATATTTTTGAA 13634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8819131424865