Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014647.1 Length=2754 Score E Sequences producing significant alignments: (Bits) Value seq19028 257 3e-65 >seq19028 Length=31091 Score = 257 bits (284), Expect = 3e-65 Identities = 571/849 (67%), Gaps = 27/849 (3%) Strand=Plus/Plus Query 1610 GCATTTTTGAGAGCCCAATTCTTTAATGAGGTGTTCTTGTCCTCGTCGAGGAATTCTTTA 1669 ||||| | | || |||||| |||||| | || || ||||| |||||||| |||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1670 TAACTGCTGTTTGGCCCAGGATTGCATAGGAAGATTGTCGGTATGCCGCCTTTAATTTGA 1729 || ||| | || ||||||||||| | ||||||||||||||| || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1730 ACTGGCTTCCCGTACTTGGTATTGGATTGCCAGTCCCTTTGGGTCCCCATAAACTCTTTA 1789 || ||| | ||||| || ||| ||| | ||||||| |||||||||||||||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTA 13974 Query 1790 AAGTGCTTGAGGAAGTGCGGATCTACGTCATCAATGACGTTATACCACGCGTCGTTACTA 1849 |||||||| || | |||||||| |||| |||||||| ||||||||| || | || | Sbjct 13975 AAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAA 14034 Query 1850 TAGACTTTTGGGCTTAGATCCAAATGCCCACATAGGTAATTATGTGGGCCTAAAGACCTA 1909 || | ||| | | ||| ||||| || ||||||||||||||||| |||||||| || Sbjct 14035 TAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTT 14094 Query 1910 GCCCACATTGTCTTCCCAGTACGACTATCACCCTCAATTACTATACTTTGAGGTCTATGA 1969 |||||| ||||||||| || | | ||||||||||| || ||||| | |||| | | Sbjct 14095 GCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAA 14154 Query 1970 -GGCCGCGCAGCGGCGTCGACAACGTTCTCGGACACCCACTCTTCAAGTTCCTCCGGGAC 2028 |||||||||||||| || ||| || || | |||| |||| Sbjct 14155 TGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA------------- 14201 Query 2029 TTGGTCGAAAGAAGAAGATGAAAAAGGAGAAACATAAACCTCCAATGGAGGTGTAAAAAT 2088 | || ||| |||||| | ||||||| ||||||| || || || | || || Sbjct 14202 -TTGTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATAT 14260 Query 2089 CCTATCTAGATTAGCATTTAAATTATGAAATTGTAATACATAATCCTTG--GGTGCTAAT 2146 | ||||| || | | || ||||||| |||| ||| | || | ||| || | | Sbjct 14261 TCGATCTAATTTTGGAACTATATTATGATATTGAAAT--AGAAACTTTGCTGGCATTTTT 14318 Query 2147 TCCTTAATGACGCTAAGAGCCTC-TGATTTACTGCCTGAGTTAAGTGCTGCGGCGTAAGC 2205 || |||| | ||| || || | | || || | |||| ||| | || | | Sbjct 14319 TCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAA-CGCTTCTGCAGATAC 14377 Query 2206 GTCGTTTGCTGTCTGTTGTCCCCCTCTTGCAGATCTTCCATCGATCTGAAATTCCCCCCA 2265 || |||| ||| ||| || ||||| ||||||| ||||||||| ||||| | ||||| Sbjct 14378 ATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCA 14437 Query 2266 CTCGAGAATGTCCCCGTCCTTGGCGATATAGGACTTGACGTCGGAGCTGGATTTAGCTCC 2325 ||| || | ||| || ||||| || ||| || || || |||||||| Sbjct 14438 GTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGA 14497 Query 2326 CTGTATGTTCGGATGGAAATGTGCTGACCTAGT-TGGGGAT--ACGAGGTCGAAGAATCT 2382 || | ||| || ||| ||||| || ||||| | |||| | || |||||| ||| Sbjct 14498 TTGGAAGTTTGGGTGG-TATGTGGTG--CTAGTATTAGGATGGATGATATCGAAGTGTCT 14554 Query 2383 CTGATTCTTGCACTGGTATTTGCCTTCGAACTGGAGGAGCACGTGAAGATGAGGTTCCCC 2442 | || | | || ||||||||||| || | || | || |||| |||||| Sbjct 14555 AGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCC 14614 Query 2443 ATTCTCGTG 2451 || || ||| Sbjct 14615 ATCCTGGTG 14623 Score = 125 bits (138), Expect = 1e-25 Identities = 296/444 (67%), Gaps = 15/444 (3%) Strand=Plus/Plus Query 950 GAATCATACTGAGAATGCGTTATTGTTGTACATGGCATGTACTCATGCCTCTAATCCTGT 1009 || ||||||||| ||||| ||||||||| || | |||||||| ||||||||||| Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1010 GTATGCTACTTTGAAAGTTAGAAGCTACTTCTACGATTCTGTAACAAATTGATATTAATA 1069 ||| |||| ||| | | || || || || || |||| |||||| |||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATT------AATA 13190 Query 1070 AATATCGAATTTTATTTCTGAAGTTTGCTTTACATACATAGTTTGTTCTAATTTATTGTA 1129 ||||| |||||||||||| | || ||||| || ||||| || | | |||| | Sbjct 13191 AATATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAA 13250 Query 1130 AAATACATGTTCTACAGCCCTAATAATGGAATTAAGTGAGATTACTCCTAGATTGTTGAT 1189 ||||||| |||||||| |||||||| |||| || || |||| || | Sbjct 13251 TAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAA 13310 Query 1190 ATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGGT 1249 | | || | || | ||| ||||| |||||||||| |||||||| |||| Sbjct 13311 AAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACG 13370 Query 1250 CGTCCAGATTTGGAAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGTAGGTTGTA 1309 |||| ||| | |||| | || ||| ||||| | ||| | ||| ||||||| Sbjct 13371 AGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTG 13430 Query 1310 GTTGAATTGGATCCTGATCTTTATTATGTCCATGTTGCTCG---TGAATGGACGGTTGTC 1366 ||||||| | || || | |||||||| |||| ||| | ||| | | | Sbjct 13431 GTTGAATCGAATTTGTATTTCGATTATGTC--GGTTG-TCGAATTTGTTGGTCTGAGATT 13487 Query 1367 GTGGTTGAGGATCTTGAAATAGAG 1390 ||||||||||||||||||||| || Sbjct 13488 GTGGTTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8700867424960