Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014707.1 Length=2736 Score E Sequences producing significant alignments: (Bits) Value seq19028 297 3e-77 >seq19028 Length=31091 Score = 297 bits (328), Expect = 3e-77 Identities = 518/748 (69%), Gaps = 33/748 (4%) Strand=Plus/Plus Query 1571 TGGCTCTGTGAGGGTGATGAATGTTGCATTATGTATAGCCCACGACCTCAGTGCTGAGTT 1630 ||| | ||||| |||| |||| ||||||||| | || ||| | | | || Sbjct 13770 TGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATT 13829 Query 1631 CTTTTCCTCATCGAGGTATTCTCTATAGCAGGAATTGGGCCCAGAATTGCAGAGGAAGAT 1690 |||||||| |||||| | ||| |||||| |||| | || |||| |||||| | |||||| Sbjct 13830 TTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGAT 13889 Query 1691 AGTGGGAATACCTCCTTTAATTTGAACTGGTTTCCCGTACTTGGTGTTACTTTGCCAGTC 1750 || || || || || || || | || || | ||||| || || || ||| | Sbjct 13890 TGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATT 13949 Query 1751 CCTCTGGACCCCCATGAACTCTTTAAAATGCTTTAGGTAGTGGGGGTCTACGTCATCAAT 1810 || ||| ||||||| ||||||||||| |||||||| || || || || |||| |||||| Sbjct 13950 GCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAAT 14009 Query 1811 GATGTTATACCATGCATCATTTGAATATATCTTGCGACTCAGATCTAAATGTCCACACAG 1870 |||||||||||| |||| ||||||||| || || | ||| ||||||||| || || || Sbjct 14010 GATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAG 14069 Query 1871 GTAATTGTGTGGTCCCAAAGACCTGGCCCACATTGTCTTGCCCGTACGACTATCACCCTC 1930 |||||| |||||||| ||||| || |||||| |||||| || || | | |||||||| Sbjct 14070 GTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTC 14129 Query 1931 AATGACGATACTTTTAGGTC-TCAATGGCCGCGCAGCGGGACCCATCACATTTTCAGAGG 1989 |||||| ||||| || |||| | |||||||||||||||| | || | |||||||||| | Sbjct 14130 AATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTG 14189 Query 1990 CCCATTCCTCTATGGCCTCTGGAACTTGATCGAAGGAAGATGAAAGAAAAGGGGAAACAT 2049 |||| ||| || | | ||||||||| || |||||| ||||| Sbjct 14190 CCCAGCACTCAATTG--------------TTGAAGGAAGAACAACTAAAAGGACTAACAT 14235 Query 2050 AAACCTCCATTGGA-GGTGCA--AAAATCCTATCTAAATTAGCATTAAGATTATGAAATT 2106 || || ||| || ||| || || | |||||| || | | | ||||||| ||| Sbjct 14236 AAGGTTC---AGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATT 14292 Query 2107 GTAAGACATAATCCTTTG-GGGC--TAATTCCCTAATGACTCTAAGAGCCTCTGACTTAC 2163 | || | | | ||||| ||| | ||| ||||| | ||| || ||| | | Sbjct 14293 GAAATAGAAA---CTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCT---TCAA 14346 Query 2164 TGCCTGTATTAATT---GCTTTGGCGTAAGCATCATTGGCTGACTGTTGTCCCCCTCTTG 2220 | |||| | || |||| || | ||||||| | || ||| || ||||| | Sbjct 14347 TTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAG 14406 Query 2221 CAGATCGTCCATCGATCTGAAACTCTCCCCAGTCGAGGGTGTCTCCATCCTTCTCCATAT 2280 |||||||||||||||| ||||| | ||||||||| | || | || ||| | || | Sbjct 14407 CAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGT 14466 Query 2281 AGGACTTGACATCTGAGCTTGACTTAGC 2308 | ||| |||||||| ||| ||||| Sbjct 14467 ATTTCTTAACATCTGAAGATGATTTAGC 14494 Score = 172 bits (190), Expect = 9e-40 Identities = 262/370 (71%), Gaps = 5/370 (1%) Strand=Plus/Plus Query 939 GAATCATACTGAGAATGCATTGATGTTGTATATGGCGTGTACGCACGCCTCTAACCCCGT 998 || ||||||||| ||||||||| |||||||| | || || || ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 999 GTATGCCACTTTGAAGATACGGATCTACTTCTATGATTCAGTATCGAATTAATAAATATT 1058 ||| ||| ||| | ||| | || || ||||| ||||| |||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1059 GAATTTTATATCATGATCCTCAATTACATTAATTGTGCCCTCAAGTACATCATATAATAC 1118 ||||||||| ||||||| |||| ||||| | ||| ||||| ||||| ||||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1119 A-TGTCTGAAAGCCTTAATACAATTATTTATACTAATTACGCCTAAACTATCTAAATATC 1177 | ||||| | ||| ||||| ||| || |||||||| || ||||| | |||||| || Sbjct 13257 ATTGTCT-ACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1178 TTAAAACTTGAGTCTTAAAGACTCTTAAGAAATGCCAAGTCTGAAGATGTAAACGAGTGT 1237 | | || || ||||| |||||||||||| | ||| || || |||||||||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1238 GGATCCTCAAGCCCAAGAAACAATTCATTATCCCCAGTCTCTTCCTGAGGTTGTGATTGA 1297 |||| | ||| | |||| || | |||| |||||| |||||||| |||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1298 ATTGTATCTG 1307 || | || || Sbjct 13436 ATCGAATTTG 13445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8643288155236