Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014745.1 Length=2764 Score E Sequences producing significant alignments: (Bits) Value seq19028 221 2e-54 >seq19028 Length=31091 Score = 221 bits (244), Expect = 2e-54 Identities = 485/717 (68%), Gaps = 30/717 (4%) Strand=Plus/Plus Query 1675 TTCTTCTCCTCTTCTAAATAGTCTTTATAGGATGAATTTGGACCTGGATTGCAGAGGAAG 1734 || || ||||| || | | ||||||||| ||| | ||||| |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1735 ATTGTTGGGATGCCCCCTTTAATTTGAACTGGCTTCCCGTATTTTGTGTTGCTTTGCCAG 1794 ||||| || || || || || || | || ||| | ||||||||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1795 TCCTTTTGTGCACCCATGAACTCCTTAAAGTGTTTCAGATAATGCGGGTCAACATCATCT 1854 | |||| || ||||| ||||| |||||||| || ||||||||||| || || | ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1855 ATGACGTTATACCATGCGTCATTACTGAACACCTTT--GGGCTCAGATCAAGATGGCCGC 1912 |||| ||||||||| || | ||| |||| | ||| ||| ||| | ||| |||| Sbjct 14008 ATGATGTTATACCAGGCATTATT--TGAATAAATTTTATTATTCAAATCTAAATGACCGC 14065 Query 1913 ACAGATAATTATGAGGCCCAAGACTTCTGGCCCATACGGTCTTTCCTGTTCTGCTTTCCC 1972 | || |||||||| || || | | ||| ||||| | ||||| |||||||| || | Sbjct 14066 ATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCAC 14125 Query 1973 CTTCAATTACTATACTAATCGGTC-TACCTGGCCGCGCAGCGGCCTCCACGACGTTCTCC 2031 | ||||| || ||||| | |||| | ||||||||||||||| ||| || || || Sbjct 14126 CCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCA 14185 Query 2032 GCCGCCCATTCTTCAAGTTCTTCTGGAACTTGGTCGAACGAAGAAGACAAAAAAGGACAA 2091 || ||||| |||| | || ||| |||||| | |||||||| | Sbjct 14186 GCTGCCCAGCACTCAA--------------TTGTTGAAGGAAGAACAACTAAAAGGACTA 14231 Query 2092 ACATAAGGAGCTGGAGGCTCCTGAAAAATCCTATCTAAATTATTAATTAAATTATGATAT 2151 |||||||| | ||||| | || || | |||||| || || || |||||||||| Sbjct 14232 ACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 2152 TGTAAAACAAAATCTTTG--GGAGCTAACTCCCTTATAACCCTAAGAGCCTCTGTC--TT 2207 || ||| | || ||||| || | || || |||| ||| || ||| || || Sbjct 14292 TG--AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCT-TCAATT 14348 Query 2208 ACTCCCTGCGTTAAGCGCTGCGGCGTAAGCGTCATTGGCTGTCTGTTGGCCTCCTCTGGC 2267 | || | | |||| | || | | ||||| | ||| ||| |||||||| || Sbjct 14349 GAT-GTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGC 14407 Query 2268 AGATCGTCCGTCGATCTGGAATTCTCCCCATTCGAGTGT-GTCTCCATCCTTGTCGATGT 2326 ||||||||| ||||| || || | ||||| ||| |||| || | || || |||||| Sbjct 14408 AGATCGTCCATCGATTTGAAAATTGCCCCAGTCG-GTGTAATCACAGTCTTTCGCGATGT 14466 Query 2327 AGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTG 2383 | ||| || || || |||||||| || | |||||| ||| ||||| || Sbjct 14467 ATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG 14522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8732855908140