Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014794.1 Length=2627 Score E Sequences producing significant alignments: (Bits) Value seq19028 129 1e-26 >seq19028 Length=31091 Score = 129 bits (142), Expect = 1e-26 Identities = 242/351 (69%), Gaps = 11/351 (3%) Strand=Plus/Plus Query 1523 TATTTTCCTCTTTGTCTAGGAAGTCTTTATAACTGGCACCCTCACCTGGATTGCAAAGCA 1582 |||||| || | || ||||| |||||||| |||| | ||| |||||||| | | Sbjct 13826 TATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGA 13885 Query 1583 CGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTTGACTG-- 1640 ||||| || ||||| || || || | || ||| | |||||||| | ||| ||| Sbjct 13886 AGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGA 13943 Query 1641 CCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAAATATTGCGGTGC 1700 ||| | | |||||||||| || ||||| |||||||||| ||| ||||| | Sbjct 13944 CCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATC 13997 Query 1701 GACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCGGGAATTGAAGTCCAG 1760 ||||| |||||||| ||||||| | | |||||| ||| | ||| || || | Sbjct 13998 GACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAA 14057 Query 1761 GTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCACATCGTCTTCCCTGTCCT 1820 || || | |||||||| ||||| ||||| | | ||||||| ||||||||||| || Sbjct 14058 ATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCT 14117 Query 1821 CGAATCACCTTCCACTATGATACTAACTGGTC-TGTCCGGCCGCGCAGCGG 1870 || ||||| || | | ||||| |||| | ||||||||||||| Sbjct 14118 AGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Score = 104 bits (114), Expect = 4e-19 Identities = 263/387 (68%), Gaps = 36/387 (9%) Strand=Plus/Plus Query 855 GAATCATACGGAGAACGCCCTGTTATTGTATATGGCATGTACTCATGCGTCTAATCCCGT 914 || |||||| || || || |||| |||||| | |||||||| |||||||| || Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 915 GTATGCAACTTTGAAGATCA-GAATCTATTTCTACGAT--TCGATCACTAATTAATAAAT 971 ||| ||| ||| || || | | ||||| || || | |||| ||||||||||| Sbjct 13137 ATATTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCA--AATTAATAAAT 13193 Query 972 TTTGAATTTTATTGAATGATTTTCCAGTACAT-----GTTCGATATACGATCTGTTTG-- 1024 |||||||||||| ||||| ||| ||||||| ||| | | | || ||| Sbjct 13194 ATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCT---CAATTACATTGAA 13250 Query 1025 TCGCGAATCGT--ACAGCTCTAATTACATTGTTAATTGAAATCACGCCTAATCTATCTAA 1082 | || || ||||||||||| | ||||||||| ||| || ||||||| ||||| Sbjct 13251 TAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAA 13310 Query 1083 ATATAAATTAACTAAGCGAC---TAAAT-CTAGCTAAATAAGTCGACC--CAGAAGCTGT 1136 | || || | || ||| ||||| || || || || || | || | || Sbjct 13311 AAAT---TTCATTACACGAAATTTAAATACT--CTTAAGAAAACGTATGTCGGAGGACGT 13365 Query 1137 CATCGATATCGTCCAGACTTGGAAGTTCAGGAAGGCTTTGTGGAGATGCAACGCTTTCCT 1196 | ||| |||| || | |||||| ||||| |||||||| |||| || | ||||| Sbjct 13366 AAACGA----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCT 13421 Query 1197 CAGGTTGTGGTTGAACCGTATTTGTAT 1223 ||||||||||||||| || |||||||| Sbjct 13422 CAGGTTGTGGTTGAATCGAATTTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8294613688574