Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014845.1 Length=2739 Score E Sequences producing significant alignments: (Bits) Value seq19028 201 2e-48 >seq19028 Length=31091 Score = 201 bits (222), Expect = 2e-48 Identities = 452/675 (67%), Gaps = 19/675 (3%) Strand=Plus/Plus Query 1576 GGTTGGGTGAGAGAGACGAATGTTGCATTCTTTAAAGCCCAGGATTTTAATGCTGAGTTC 1635 ||||| |||| | | |||| |||||| | |||| ||| ||||||| || Sbjct 13771 GGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTT 13830 Query 1636 TTATCCTCGTCTAAGAACTCTTTATAGCTTGCATTGGGCCCTGGATTGCAGAGGAAGATT 1695 || ||||| || | ||||||||||||||| | | | || || |||||||| | ||||||| Sbjct 13831 TTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATT 13890 Query 1696 GTTGGTATGCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTGTTTGATTG-CCAGTC 1754 || ||||| || || || || | || ||| | ||||||||| ||| | | ||| | Sbjct 13891 GTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATT 13949 Query 1755 CCTTTGGGCCCCCATGAATTCTTTAAAGTGTTTTAGGAAGTGTGGATCGACGTCATCAAT 1814 |||||||||||||| || ||||||||||| ||||| | || |||||||||| |||||| Sbjct 13950 GCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAAT 14009 Query 1815 GACGTTATACCAAGCGTCGTTACTGTACACCTTTGGGCTAAGGTCCAGATTCCCGCATAA 1874 || ||||||||| || | || || | || | | || | || ||||||| Sbjct 14010 GATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAG 14069 Query 1875 ATAGTTATGTGGGCTTAAAGACCTAGCCCACATTGTTTTTCCAGTACGACTATCTTCCTC 1934 || |||||||| | |||||| || |||||| ||| || || || | | || |||| Sbjct 14070 GTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTC 14129 Query 1935 AATTACTATACTTTGAGGTC-TCAGGGGCCGCGCAGCGGCATCGACAACGTTCTCGCACG 1993 ||| || ||||| | |||| | | ||||||||||||||||| ||| || || | Sbjct 14130 AATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTG 14189 Query 1994 CCCACTCTTCAAGTTCTTCTGGAACTTGATCAAATGAAGANNNNNNNNNNNNAGAAACAT 2053 |||| |||| | | |||| || ||| | || | ||||| Sbjct 14190 CCCAGCACTCAATTGTTGAAGGAA---GAACAACTAAA-----------AGGACTAACAT 14235 Query 2054 AAGGAGCTGGA-GGCTCCTGAAAATATCTATCTAAATTAGAATTTAAATTATGAAATTGA 2112 |||| | ||| || | |||| || || |||||| || | | || ||||||| ||||| Sbjct 14236 AAGGTTCAGGAGGGGGCATGAATAT-TCGATCTAATTTTGGAACTATATTATGATATTGA 14294 Query 2113 AGTAGAAAGTCTCTTGGGGCTTTTTCCTTCAGTATATTGAGGGCCTGAGCTTTGGACCCT 2172 | |||||| | | ||| |||||| | | ||| || || | | | || Sbjct 14295 AATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTA 14354 Query 2173 GCGTTGATTGCCTCGGCATATGCGTCGTTGGCAGTTTGGCAACCTCCTGTAGCTGATCTT 2232 || | | || || ||| || | || || | || || |||||||| |||| |||| | Sbjct 14355 GCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGT 14414 Query 2233 CCATCGACTTGGAAA 2247 ||||||| ||| ||| Sbjct 14415 CCATCGATTTGAAAA 14429 Score = 100 bits (110), Expect = 5e-18 Identities = 287/441 (65%), Gaps = 9/441 (2%) Strand=Plus/Plus Query 940 GAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCAGT 999 || ||| || || ||||||||| || ||||| || || ||||| ||| || || Sbjct 13080 GACTCATACTGAAAATGCATTGTTG---TATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1000 TTATGCTACTCTTAAGATTCGGATATATTTTTATGACTCTGTAACGAATTGAAATTAATA 1059 ||| |||| | | | || | ||||||||||| |||| | ||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATC------AAATTAATA 13190 Query 1060 AAGTTTTAATTTTATATCTGAATATTGGTCTACATACATTGTTTGATTAATTACATTGTA 1119 || || |||||||| || ||||| ||||| || |||||| | |||||||||| | Sbjct 13191 AATATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAA 13250 Query 1120 CAATACATGTTCAACGGCTTTAATAACTAAATTAAGTGAGATTACACCTAGATTGTTGAG 1179 ||||||| || || ||| |||||| |||| || ||||||| || | Sbjct 13251 TAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAA 13310 Query 1180 ATACTTGAATACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCTGAGGGTGTAAGGT 1239 | | || | ||| | ||| ||||| |||||||||| ||| |||| |||| Sbjct 13311 AAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACG 13370 Query 1240 CGTCCAGATTCGGAAGGTTAGAAAACACTTGTGCACTCCCAGAGCTTTCCGTAGGTTGTA 1299 |||| ||| |||| | || ||| ||||| | ||| | |||| ||||||| Sbjct 13371 AGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTG 13430 Query 1300 GTTGAATTGGATCCTCATTGTTATGATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTG 1359 ||||||| | || ||| || ||||| | ||| | ||| | | | ||| Sbjct 13431 GTTGAATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTG 13490 Query 1360 GCTGAGGATTTTGAAATAAAG 1380 | ||||||| |||||||| || Sbjct 13491 GTTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8652884700190