Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014847.1 Length=2723 Score E Sequences producing significant alignments: (Bits) Value seq19028 208 1e-50 >seq19028 Length=31091 Score = 208 bits (230), Expect = 1e-50 Identities = 480/717 (67%), Gaps = 21/717 (3%) Strand=Plus/Plus Query 1555 AACGGTTGGGTGAGGAAGACGAATGCTGCATTTTTTAAAGCCCACGCTTTTAAAGCTGAG 1614 || ||||| |||| | | |||| ||||||| | |||| ||| |||||| Sbjct 13768 AATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATA 13827 Query 1615 TTCTTTGCCTCGTCCGAGAACTCTTTATAGCTTCCGTTGGGGCCTGGATTGCAGAGGAAG 1674 || ||| |||| || ||||||||||||||| | || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1675 ATTGTTGGTATGCCCCCTTTAATGTGAACTGGCTTCCCGTACTTTGTGTCTGATTG-CCA 1733 ||||| ||||| || || || || | || ||| | ||||| ||| | || | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCT-TGCTGGACCA 13946 Query 1734 ATCCCTTTGGGCCTCCATGAATTCTTTAAAGTGTTTCAGATAATGCGGGTCAACATCATC 1793 || ||||||||| |||| || ||||||||||| || ||||||||||| || || | ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1794 TATAATGGTGAACCACGCATCGTTTGAATACACTTTAGGGCTTAGATCTAGATGCCCACA 1853 || ||| | |||| |||| |||||||| | |||| | | ||||| ||| || || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1854 CAAATGGTTATGTGGACCCAGTGATCTAGCCCACATCGTCTTCCCGGTACGACTATCTCC 1913 | | |||||||| || | ||||| |||||| |||||||| || | | || || Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1914 CTCAATCACTATACTTTGTGGTC-TATGTGGCCGCGCAGCGGCGTCGACAACGTTCTCGG 1972 |||||| || ||||| | |||| | ||||||||||||||| || ||| || || | Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAG 14186 Query 1973 CAGCCCATTCCTCAAGTTCTTCCGGAACTTGGTCAAAAGAGGAAGAAGGAAAAGGAGAAA 2032 | ||||| ||||| | || || || ||| || ||||||| || Sbjct 14187 CTGCCCAGCACTCAA--------------TTGTTGAAGGAAGAACAACTAAAAGGACTAA 14232 Query 2033 CATAAACCTCCACAGGAGGTGTAAAAATCCTATCTAAATTAGCATTTAAATTATGGAATT 2092 ||||| || ||| || | || || | |||||| || | | || |||||| ||| Sbjct 14233 CATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATT 14292 Query 2093 GTAATACATAATCTTTTGGAGCTAACTCCTTAATGACTCTAAGAGCCTC-TGACTTACTG 2151 | |||| | | | | ||| | || |||| | ||| || || | | || || Sbjct 14293 GAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG 14352 Query 2152 CCTGCGTTAAGCGCTGCGGCGTCAGCGTCGTTGGCTGTCTGTTGTCCCCCTCTAGCAGAT 2211 || | | |||| | || | || || | ||| ||| || |||||||||||| Sbjct 14353 -TAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGAT 14411 Query 2212 CGTCCGTCGATCTGAAACTCTCCCCACTCGAGAGT-GTCCCCGTCCTTGTCGATGTA 2267 ||||| ||||| ||||| | ||||| ||| | || || | ||| || ||||||| Sbjct 14412 CGTCCATCGATTTGAAAATTGCCCCAGTCG-GTGTAATCACAGTCTTTCGCGATGTA 14467 Score = 104 bits (114), Expect = 4e-19 Identities = 237/357 (66%), Gaps = 6/357 (2%) Strand=Plus/Plus Query 1006 TTATTTTTATGACTCTGTAACGAATTGAAATTAATAAAGTTTGAATTTTATATCTGAATA 1065 |||||||||||| |||| | ||||||||||| ||||||||||| || ||| Sbjct 13161 TTATTTTTATGAGAGTGTATC------AAATTAATAAATATTGAATTTTATTTCATGATA 13214 Query 1066 TTGGTCTACATACATTGTTTGATTAATTACATTGTACAATACATGTTCAACGGCTTTAAT 1125 || ||||| || |||||| | |||||||||| | ||||||| || || ||| |||| Sbjct 13215 TTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTGTCTACAGCTCTAAT 13274 Query 1126 AACTAAATTAATTGAGATTACACCTAGATTGTTGAGATATTTGAGGACTTGGGTTTTGAA 1185 || ||||| || ||||||| || | | |||| | || | ||| || Sbjct 13275 AATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATTACACGAAATTTAAA 13334 Query 1186 TTCCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGGAAGGTTAGAAA 1245 | | |||||||||| |||||||| |||| |||| ||| |||| | || || Sbjct 13335 TACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGATCTTGAAGTTGAGGAA 13394 Query 1246 ACACTTGTGCACTCCCAGAGCTTTCCGAAGGTTGTAGTTGAATTGGATCCTCATTGTTAT 1305 | ||||| | ||| | |||| ||||||| ||||||| | || ||| || Sbjct 13395 AGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGAATTTGTATTTCGAT 13454 Query 1306 GATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGTTGAGGATTTTGAAATAAAG 1362 ||||| | ||| | ||| | | | |||||||||||| |||||||| || Sbjct 13455 TATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGGTTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8601703127102