Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014894.1 Length=2724 Score E Sequences producing significant alignments: (Bits) Value seq19028 214 3e-52 >seq19028 Length=31091 Score = 214 bits (236), Expect = 3e-52 Identities = 275/377 (73%), Gaps = 7/377 (2%) Strand=Plus/Plus Query 1615 TTCTTATCCTCGTCTAAGAACTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAG 1674 || || ||||| || | |||||||||||| ||| | |||||||||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1675 ATTGTTGGTATGCCGCCTTTAATTTGAACTGGCTTTCCGTACTTT---GTGTTGGATTGC 1731 ||||| ||||| || || || || | || ||| ||||||| ||| || |||| | Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGA---C 13944 Query 1732 CAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTGAGGAAGTGGGGATCTACGTCA 1791 || | |||||||||||||| |||||||||||||| || || | || ||||| |||| | Sbjct 13945 CAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTA 14004 Query 1792 TCAATGACGTTATACCAGGCCTCGTTACTGTAGATCTTTGGACTAAGGTCTAGATGCCCA 1851 ||||||| |||||||||||| | || || || || | | | |||| ||| || Sbjct 14005 TCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCG 14064 Query 1852 CACAAATAGTTATGTGGACCCAGTGATCTAGCCCACATCGTCTTCCCGGTACGACTATCT 1911 || | || |||||||| || | ||||| |||||| |||||||| || | | || Sbjct 14065 CATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCA 14124 Query 1912 CCCTCAATCACTATACTTTGTGGTC-TAAGTGGCCGCGCAGCGGCGTCGACAACGTTCTC 1970 |||||||| || ||||| | |||| | | ||||||||||||||| || ||| || || Sbjct 14125 CCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184 Query 1971 GGCAGCCCATTCCTCAA 1987 || ||||| ||||| Sbjct 14185 AGCTGCCCAGCACTCAA 14201 Score = 118 bits (130), Expect = 2e-23 Identities = 289/438 (66%), Gaps = 9/438 (2%) Strand=Plus/Plus Query 925 TCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTA 984 ||| ||||| ||||| |||| ||||||| | |||||||| ||||| ||||| || Sbjct 13083 TCATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 985 TGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACGAATTAATATTAATAAAG 1044 | |||| ||| | | ||||| || || || |||| | | ||||||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTA------TCAAATTAATAAAT 13193 Query 1045 ATCGAATTTTATATCTGAATATTGATCCACATACATTGTTTGTTGAATTACATTGTACAA 1104 || ||||||||| || ||||| | |||| || |||||| | |||||||||| | || Sbjct 13194 ATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAA 13253 Query 1105 TACGTGTTCTACAGCCTTAATTACTAAATTAATTGAGATTACACCTAGATTGTTGAGATA 1164 ||| | |||||||| |||| | ||||| || ||||||| || | | | Sbjct 13254 TACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAA 13313 Query 1165 CTTGAGGACTTGGGTTTTTAATACCCTTAAGAAAAGACCAGTCTGAGGGTGTAAGGTCGT 1224 || | || | ||| ||||| |||||||||| ||| |||| |||| || Sbjct 13314 TTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGT 13373 Query 1225 CCAGATTCGGAAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTT 1284 || ||| |||| | || ||| ||||| | ||| | ||| ||||||| ||| Sbjct 13374 CCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTT 13433 Query 1285 GAATTGGATCCTGATTTTTATTATGTCCATGTTCGTCGTGAATGGACGGTCGTCGTGGCT 1344 |||| | || |||| |||||||| | ||| | ||| | | | |||| | Sbjct 13434 GAATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGGTT 13493 Query 1345 GAGGATCTTGAAATAGAG 1362 ||||||||||||||| || Sbjct 13494 GAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8604901975420