Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014902.1 Length=2727 Score E Sequences producing significant alignments: (Bits) Value seq19028 311 1e-81 >seq19028 Length=31091 Score = 311 bits (344), Expect = 1e-81 Identities = 735/1106 (66%), Gaps = 73/1106 (7%) Strand=Plus/Plus Query 964 TCATACTGAGAATGCGTTGTTATTGTATATGGCATGTACTCATGCTTCAAACCCTGTGTA 1023 ||||||||| ||||| ||||| |||||| | |||||||| || || ||||| || Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1024 TGCGACATTAAAGATCAGG-ATCTATTTCTATGATTCTGTTGGAAATTAATAAAGATTGA 1082 | || | | || || | | ||||| ||||| ||| ||||||||||| ||||| Sbjct 13140 TTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGA 13198 Query 1083 ATTTTATTTCATTGTTTTGTTGCACCTCAATTGTGCCTTCAAATACATTGTACATTACAT 1142 |||||||||||| | || | || || | ||| |||| ||||||| | | ||||| Sbjct 13199 ATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1143 GATCGACAGATCGAATAACATTATTAATACAAAGTACGCCTAAACTATTCAGAAATTGAA 1202 || |||| || ||||| ||| ||||||| || || ||||| | | | ||||| | Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1203 A-ACT-GAAGCTTAAATGTCTTTAAGAAAAGACCAGTCGGAGGCCGTAAGGTCGTCCAAA 1260 || ||| |||||| ||||||||| |||||||| ||||| |||| | Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1261 TTTTGAAGGTCAAAAAACATTTGTGAATCCCCAGTGCCTTCCTTAAGTTGTGGTTGAATC 1320 | |||||| | | ||| |||||||| |||| ||||||| | |||||||||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1321 TGATCTGGACAGTCAAAATGTCG-TTGTTGCTGTTGAACGGTCTCTTGTGATGCTCGAGG 1379 || || | | |||||| |||| | ||| ||||| | || | |||| Sbjct 13439 GAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTT-GGTCTGAGATTGTGGTTGAGG 13497 Query 1380 ATCTTGAAATATAGGGG-ATTTTTTATCTCCCAGATATAT-------------------A 1419 |||||||||||||| | | ||| ||||| |||| | | Sbjct 13498 ATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAGA 13557 Query 1420 CGCCATTCTGTGCTTGAATTGCAGTGATGTTCTCCCCTGTGCGTAAATCCATGGTTAGCA 1479 |||||||| ||||| |||||||||| ||||||||||||| ||||||| || | Sbjct 13558 CGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAGAA 13617 Query 1480 CAGTTAATGTGCATATAATAT-GAGCAGCCGCACTTGAGGTCAATTCGTTTGCGTCGAAT 1538 ||| |||| | | ||||| || || || || ||||| | |||| | | || || Sbjct 13618 CAGCTAATATTTTTG-AATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCTGAT 13676 Query 1539 TGCTTTCTTCTTGG----CGCACCTGT-------GTTGCGCT--TTGATTGACGG----- 1580 | | |||||||| || | ||| ||||| | ||| | | | Sbjct 13677 TTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCTATG 13736 Query 1581 -------TGGT----------------GAAAAATGGTTCTTTGATGGTGTAGAATTCCGC 1617 ||| ||| ||||||| | |||||||||||||||| || Sbjct 13737 CATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTCTGC 13796 Query 1618 ATTCTTGGAAGCCCACAATTTTAGTGATGCATTTGCTTCCTCGTCGAGGAACTCTTTATA 1677 ||| | ||| ||| ||||| | |||| |||||| ||||||||||||||||| Sbjct 13797 ATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATA 13856 Query 1678 AGAAGATTTGTTGCCTGGGTTGCAGAGAAAGATTGTGGGGATACCACCTTTAATCATTGT 1737 || | || || ||||| | |||||||| || || ||||| || ||| || Sbjct 13857 GCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTAC 13916 Query 1738 GGGCTTTCCGTATTTGACGTTACTTTGCCAGTCACGTTGTGCGCCCATGAATTCTTTGAA 1797 ||| |||||||||| || || || ||| | | ||| || ||||| || ||||| || Sbjct 13917 AGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAA 13976 Query 1798 ATGTTTCAAATAATGCGGATCGACGTCATCAATGACGTTATACCATGCATCGTTGGAATA 1857 || || | ||||||||||||||||| |||||||| ||||||||| |||| || ||||| Sbjct 13977 GTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATA 14036 Query 1858 CACTTTCGGACTAAGGTCCAAATGGCCGCAGAGATAATTGTGCGGCCCCAATGCACGAGC 1917 | ||| | | | || ||||| ||||| || ||||| || || || || | | || Sbjct 14037 AATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGC 14096 Query 1918 CCATGTCGTCTTCCCAGTACGACTATCACCTTCAATGACAATGCTAATCGGTC-TTTCTG 1976 ||| |||||||| || | | ||||| ||||||||||| || | |||| || || Sbjct 14097 CCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATG 14156 Query 1977 GCCGCGCAGCGGAATCCTTCACATTT 2002 |||||||||||| |||| | |||||| Sbjct 14157 GCCGCGCAGCGGCATCCCTAACATTT 14182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8614498520374