Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_015043.1 Length=2679 Score E Sequences producing significant alignments: (Bits) Value seq19028 134 2e-28 >seq19028 Length=31091 Score = 134 bits (148), Expect = 2e-28 Identities = 267/391 (68%), Gaps = 11/391 (3%) Strand=Plus/Plus Query 1540 GAATTTCGCATTATGGAGAGTCCAGTTTCTCAGAGATGCATTTTCCTGCTTGTCTAGGAA 1599 ||||| |||||||| | || ||| ||| | | ||||| | || || ||||| Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAA 13847 Query 1600 ATCTTTATAGCTGGCTCCCTCACCTGGATTGCAGAGCACGATTGATGGGATTCCTCCTTT 1659 ||||||||||||| ||| |||||||| | | ||||| || || || || || Sbjct 13848 CTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTT 13907 Query 1660 AATTTGAACTGGCTTCCCGTACTTGCAATTTGACTG--CCAGTCTTTTTGTGCACCAATC 1717 || | || ||| | ||||| || | ||| ||| ||| | |||| || || || Sbjct 13908 TATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACCAATTGCTTTGGGCCCCCATA 13965 Query 1718 AGCTCCTTCCAGTGCTTTAGCTTTAGATAATGCGGTGTGACATCATCGATGACGTTGTAC 1777 | ||| || ||||||| |||||||||||| ||| | ||| |||| ||| ||| Sbjct 13966 AACTCTTTAAAGTGCTT------TAGATAATGCGGATCGACGTTATCAATGATGTTATAC 14019 Query 1778 AGGACATTATTGGAGTAGACCCTTGGATTGAAGTCCAGATGTCCACTAAGATAATTATGT 1837 | ||||||| || || | | ||| || || | ||| || | || ||||||||| Sbjct 14020 CAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGT 14079 Query 1838 GGGCCTAACGCACGAGCCCACATTGTCTTCCCTGTCCTTGAATCACCTTCGACGATGATA 1897 || ||||| | | |||||| |||||||||||| || || ||||| || | || ||| Sbjct 14080 GGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATA 14139 Query 1898 CTCATAGGTC-TCTCTGGCCGCGCAGCGGCA 1927 ||| | |||| | |||||||||||||||| Sbjct 14140 CTCTTGGGTCGTTAATGGCCGCGCAGCGGCA 14170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8460953801110