Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_015045.1 Length=2717 Score E Sequences producing significant alignments: (Bits) Value seq19028 145 1e-31 >seq19028 Length=31091 Score = 145 bits (160), Expect = 1e-31 Identities = 414/627 (66%), Gaps = 36/627 (6%) Strand=Plus/Plus Query 1637 TCGAGGAAATCTTTATAACTAGATCCCTCGCCTGGATTGCAGAGCACGATTGATGGAAGC 1696 |||||||| |||||||| || || || |||||||| | | ||||| || | | Sbjct 13840 TCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATC 13899 Query 1697 CCGCCTTTAATTTGAACTGGCTTTCCGTATTTGCAATTTGATTG-CCAGTCCTTTTGAGC 1755 || || || || | || ||| |||||||||| | ||| | | ||| | |||| || Sbjct 13900 CCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTTGGGC 13958 Query 1756 CCCAATCAATTCTTTCCAGTGCTTTAGCTTTAGATAATGCGGGCTTACATCATCAATGAC 1815 ||| || || ||||| ||||||| |||||||||||| || | |||||||| Sbjct 13959 CCCCATAAACTCTTTAAAGTGCTT------TAGATAATGCGGATCGACGTTATCAATGAT 14012 Query 1816 GTTGTAC--TCCACTAAGTTTGAATAAACCCTAGAATTGAAATCTAGGTGCCCGCTAAGA 1873 ||| ||| || || |||||||||| || ||| ||||||| || |||| || Sbjct 14013 GTTATACCAGGCATTA--TTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGG 14070 Query 1874 TAATTATGTGGGCCTAACGCACGAGCCCACATTGTCTTCCCCGTCCGACTATCGCCCTCG 1933 ||||||||||| ||||| | | |||||| ||||||||| || | | || ||||| Sbjct 14071 TAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCA 14130 Query 1934 ATGATCAAACTTATGGG-CCTAACAGGCCGCGCAGCGGCACCTCTCCCGAA-ATACTCGT 1991 |||| | ||| |||| | | | ||||||||||||||| |||| || || || Sbjct 14131 ATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA----TCCCTAACATTTTCAG 14186 Query 1992 CAGCCCATTCTTGCATCTCGTCAGGAACATTAGTGAAGGAGGAGAGGTGAAACGGAGAAG 2051 | ||||| ||| ||| ||| ||||||| || ||| ||| | Sbjct 14187 CTGCCCA-----GCA-CTC--------AATTGTTGAAGGAAGAACAACTAAAAGGACTAA 14232 Query 2052 CCCAAGGCTCCGGAGCCTTAGAGAATATCCTGTCCAGGTTACTGGA--CAGATTGTGATA 2109 | |||| || |||| |||||| | || | || |||| | ||| ||||| Sbjct 14233 CATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTT--TGGAACTATATTATGATA 14290 Query 2110 CTGAAATAAGAACTTTTCCGGTAACTTCTCCTTTATTATTTGCATCGCTGCTTCTTTGGT 2169 ||||||| |||||| | || | || || | || || | |||| |||| | | Sbjct 14291 TTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGA 14350 Query 2170 CGATGCATTTAACGCCTCTGCTGCAGCGTCATTAGCTGTTTGCTTACCTCCTCTAGCAGA 2229 | ||| ||||||| ||||| | | ||||| | ||| || ||||||||||||||| Sbjct 14351 TGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGA 14410 Query 2230 TCTCCCGTCGATCTGGAATTCTCCCCA 2256 || || ||||| || || | ||||| Sbjct 14411 TCGTCCATCGATTTGAAAATTGCCCCA 14437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8582510037194