Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_015046.1 Length=2680 Score E Sequences producing significant alignments: (Bits) Value seq19028 205 2e-49 >seq19028 Length=31091 Score = 205 bits (226), Expect = 2e-49 Identities = 545/823 (66%), Gaps = 35/823 (4%) Strand=Plus/Plus Query 1577 TTTTCCTCTTTGTCGAGGAAATCTTTATAGCTGGCCCCTTCACCTGGATTGCAGAGCACG 1636 |||||||| | ||||||| ||||||||||||| ||| |||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1637 ATTGATGGGATCCCGCCTTTAATTTGAACTGGCTTTCCGTATTTGCAATTTGACTG--CC 1694 |||| || ||||| || || || | || ||| |||||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1695 AGTCTTTTTGGGCCCCAATTAGCTCTTTCCAGTGCTTCATCTTTAGATATTGCGGACTGA 1754 | | |||||||||| || | |||||| ||||||| |||||| |||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTT------TAGATAATGCGGATCGA 13999 Query 1755 CATCATCGATGACGTTGTACTCCGCTTTATTCGAGTAAACCCTAGAATTGAAGTCCAGGT 1814 | | ||| |||| ||| ||| || ||||| || |||| || ||| || || | | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1815 GTCCGCTCAAATAATTATGTGGGCCTAACGCACGAGCCCACATCGTCTTCCCCGTCCGAC 1874 | |||| | ||||||||||| ||||| | | |||||| |||||||| || | | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1875 TATCACCCTCGACGATCAAACTGATAGGTC-TCTCCGGCCGCGCAGCGGCACCCCTCCCA 1933 |||||||| | || | ||| | |||| | ||||||||||||||| |||| | Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---A 14176 Query 1934 AAATAATCATCGGCCCATTCTTGCATCTCGTCCGGGACGGCAGTGAAGGAGGAGAGTTGA 1993 | || ||| | ||||| ||| ||| | ||||||| || | Sbjct 14177 ACATTTTCAGCTGCCCA-----GCA-CTCAATTG--------TTGAAGGAAGAACAACTA 14222 Query 1994 AACGGAGGAACCCACGGCTCCGGAGCCTTCGAGAAAATCCGATCTAAATTGCTATTTAGA 2053 || ||| ||| | || || |||| | ||| || |||||||| || | || | Sbjct 14223 AAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATA 14282 Query 2054 TTATGAAATTGAAATAAATATTTCTCCGGCAATTTCTCTCTGACTATTTGGAGCGCCGCT 2113 |||||| ||||||||| | | || | |||| ||| ||||| | || ||||| || Sbjct 14283 TTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCT 14342 Query 2114 TCTTTTGAAGGGGCGTTTAAAGCCTCTGCGGCAACGTCGTTAGCTGTTTGGCAACCTCCT 2173 || |||| | || |||| || ||||| | || || || | ||| || |||||||| Sbjct 14343 TCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCT 14402 Query 2174 CTAGCACTTCTCCCGTCGATCTGGAATTCTCCCCATTCGAGGGTATCGCCGTCTTTGTCG 2233 |||||| || || ||||| || || | ||||| ||| | ||| | |||||| || Sbjct 14403 CTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCG 14462 Query 2234 ATGTAGGACTTGACGTCGGACGATGATTTAGCTCCCTGAATGTTCGGATGGAAATGCGTT 2293 ||||| ||| || || || ||||||||||| || | ||| || ||| ||| | | Sbjct 14463 ATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGT 14521 Query 2294 GACCGGGTTTGGGA--GACCAAGTCGAAGAGTCTGTTATTCGTGCATTGGAACTTCCCTT 2351 | | | || ||| || | |||||| |||| || | |||| ||| |||| Sbjct 14522 G-CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTT 14580 Query 2352 CGAACTGGAGGAGGACGTGGAGATGAGGCTCCCCATCTTCGTG 2394 |||| || | ||| | ||| |||| |||||||| | ||| Sbjct 14581 CGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTG 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8464152649428