Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_015124.1 Length=2740 Score E Sequences producing significant alignments: (Bits) Value seq19028 246 5e-62 >seq19028 Length=31091 Score = 246 bits (272), Expect = 5e-62 Identities = 261/343 (76%), Gaps = 1/343 (0%) Strand=Plus/Plus Query 1637 tttttttCTTCGTCCAAGAATTCTTTATAGCTGGAATTGGGGCCAGGATTGCAGAGGAAG 1696 |||||||| || || | ||| ||||||||||||||| | || ||||||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1697 ATAGTGGGAATACCGCCTTTAATTTGAACAGGTTTCCCGTACTTCGTGTTGCTTTGCCAG 1756 || || || || || || || || | ||||| | ||||| || ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1757 TCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAATGCGGATCCACGTCATCG 1816 | |||||||||||||| || ||||||||||||||||| ||||||||||| |||| ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1817 ATGACGTTGAACCAGGCATCATTACTGTACACCTTTGGACTCAAATCTAAATGACCACAT 1876 |||| ||| ||||||||| ||| || | || | |||||||||||||||| ||| Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1877 AAATAATTGTGTGGACCCAATGATCGGGCCCACATCGTCTTCCCCGTCCTGCTATCACCC 1936 | ||||| ||||| || || |||| |||||| |||||||| || || |||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1937 TCTATGACTATACTTACTGGTC-TCAAAGGCCGCGCAGCGGCA 1978 || ||||| ||||| |||| | || ||||||||||||||| Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA 14170 Score = 154 bits (170), Expect = 3e-34 Identities = 309/441 (70%), Gaps = 23/441 (5%) Strand=Plus/Plus Query 954 CACACAGAAAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTAT 1013 || || |||||||| ||||| |||||| | |||||||| |||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1014 GCTACTTTGAAGATCAGG-ATCTATTTCTACGATTCTGT-TCAGAATTAATAAAGATTAA 1071 |||| ||| || || | | ||||| || || ||| ||| |||||||||| ||| | Sbjct 13141 TGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTGA 13198 Query 1072 ATTTTATTATACTTGAATCTTCT-GTA--TCAATTGTGCCTTCTAATACATTGTACAATA 1128 |||||||| | ||| | ||| ||| || | ||| || | ||||||| | |||| Sbjct 13199 ATTTTATTTCA--TGA-TATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATA 13255 Query 1129 CATGAGACATTGCTCTAATTACATTATTGATGCTAATAACTCCTAAATTGTCTAAATACT 1188 ||| | |||||||| | ||| || || |||||||| ||||| ||||||| | | Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1189 TAAT-ACATTGATATTTAAATACTCTTAAGAAACGCGAGGTCTGAGGATGTAAACGAGTC 1247 | || ||| || |||||||||||||||||||| | ||| ||||| ||||||||||| Sbjct 13316 TCATTACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1248 CAAACTCGGCAGATTAGAAAACATTGGTGTATCCCCAATGCTTTCCTCAGGTTGTAATTG 1307 | | | || | || ||| || ||| | || | | ||||||||||||| ||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1308 AATTGGACTTGTATTGTGATGATGTCGTGGTTCGTCAGAA----ATGGTCTCTCGTCGTG 1363 ||| | | ||||||| ||| ||||| |||| ||| ||| |||||| | ||| Sbjct 13435 AATCGAATTTGTATTTCGATTATGTC--GGTT-GTC-GAATTTGTTGGTCTGAGATTGTG 13490 Query 1364 GCTGGTTATCTTGAAATATAG 1384 | || |||||||||||||| Sbjct 13491 GTTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8656083548508