Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_015317.1 Length=2782 Score E Sequences producing significant alignments: (Bits) Value seq19028 215 9e-53 >seq19028 Length=31091 Score = 215 bits (238), Expect = 9e-53 Identities = 451/665 (68%), Gaps = 31/665 (5%) Strand=Plus/Plus Query 1704 CCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTTCCGTAT 1763 || |||||||| | |||||| || || || || || || || | || ||| |||||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1764 TT-ACAGT--TGGATTGCCAGTCCTTCTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGG 1820 || || | |||| | | | ||| ||||||||||| || ||||||||||||||||| Sbjct 13930 TTTACCTTGCTGGAC--CAATTGCTT-TGGGCCCCCATAAACTCTTTAAAGTGCTTTAGA 13986 Query 1821 TATTGGGGGTTGACGTCATCAATGATGTTATACCAAGCACTGTTGCTATACACTTTTGGA 1880 || || || | ||||| |||||||||||||||||| ||| | || ||| | ||| | Sbjct 13987 TAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTA 14046 Query 1881 CTCAGATCTAAATGACCACACAGATAATTATGTGGACCTAAAGACCTAGCCCAAACTGTT 1940 ||| |||||||||||| || || ||||||||||| |||||||| || ||||| |||| Sbjct 14047 TTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTC 14106 Query 1941 TTACCTATCCTACTTGGGCCTTCTATTACAATACTTATGGG-CCTATCTGGCCGCGCAGC 1999 || ||| | ||| || || || |||||||| |||| | | |||||||||||| Sbjct 14107 TTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGC 14166 Query 2000 GGAATCCATGACATTTTCAGCAGCCCAATCGCTGATAATGTCAGGAACATTATTGAAAGA 2059 || |||| | ||||||||||| |||| | | || | ||| ||||| || Sbjct 14167 GGCATCCCTAACATTTTCAGCTGCCC-AGCACTCA-------------ATTGTTGAAGGA 14212 Query 2060 AGAAGATAAAAAAGGTGAAGAATATACAGANNNNNNNNNNNNA--AAAATCCTATCTAAA 2117 |||| | ||||| || || ||| | | || || | |||||| Sbjct 14213 AGAACAACTAAAAG--GACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAAT 14270 Query 2118 TTACCACATAAATTGTGGTATTGAAAAATAAATTTCTCAGGGAGTTTTTCCCTGATAATT 2177 || | || ||| || |||||||| | ||| || | || | |||||| || |||| | Sbjct 14271 TTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAA-T 14329 Query 2178 TGTAAGGCAGCTTCTTTACTTCCTG-AG--TTTAAGGCCTCTGCTGCTGCGTCATTAGCC 2234 | ||| ||||||| | || || || |||| || ||||| | | | ||||| | Sbjct 14330 AGAAAG--CGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTT 14387 Query 2235 GTCTGCTGGCCTCCTCGAGCAGATCTGCCGTCGACCTGGAATTCACCCCATTCAATTGTG 2294 || || ||||||| |||||||| || |||| || || | ||||| || | Sbjct 14388 GTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAA 14447 Query 2295 TCACCGTCCTTATCGACATAGGACTTGACATCGGAGCTGGATTTAGCTCTCTGGATATTG 2354 |||| ||| || ||| || ||| ||||| || |||||||| |||| || Sbjct 14448 TCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTT 14507 Query 2355 GGGTG 2359 ||||| Sbjct 14508 GGGTG 14512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8787143280415