Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_015397.1 Length=2566 Score E Sequences producing significant alignments: (Bits) Value seq19028 98.7 2e-17 >seq19028 Length=31091 Score = 98.7 bits (108), Expect = 2e-17 Identities = 151/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 2026 ATTGTGATATTGGAAGAGAAACTTCTCCGGCAGTTTCTCTCTGACGATTTGCATTGCTTC 2085 ||| |||||||| || |||||||| | |||| ||| ||||| | || | ||||| Sbjct 14282 ATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTC 14341 Query 2086 TTCTTTCGAAGAAGCATTTAACGCCTCTGCTGCAGCGTCGTTAGCCGTCTGCTGACCTCC 2145 ||| | || | |||| ||||||| ||||| | | || || | || || |||||| Sbjct 14342 TTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCC 14401 Query 2146 TCTAGCAGATCGTCCGTCGATCTGGAATTGACCCCATTCGAGGATATCACCGTCCTTGTC 2205 ||||||||||||||| ||||| || || | ||||| ||| | ||||| ||| || | Sbjct 14402 TCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGC 14461 Query 2206 GAGGTAGTGACTTGACGTCGGAGCTAGATTTAGC 2239 || ||| | ||| || || || |||||||| Sbjct 14462 GATGTA-TTTCTTAACATCTGAAGATGATTTAGC 14494 Score = 89.7 bits (98), Expect = 8e-15 Identities = 183/270 (68%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 1544 CTCGAGGAAGTCTTTATAGCTGGACCCTTCACCAGGATTGCAAAGCACGATTGATGGGAT 1603 ||||||||| |||||||||||||| |||||||||||| | | ||||| || || Sbjct 13839 CTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTAT 13898 Query 1604 ACCGCCTTTAATTTGAACAGGCTTTCCATATTTGCAGTTGCTTTGCCAGTCTCGTTGGGC 1663 || || || || | |||||| |||| ||||| ||||| ||| | | |||||| Sbjct 13899 CCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGC 13958 Query 1664 CCCAACGAGCTCTTTCCAGTGCTTTAGCTTTAGGTATTGCGGTGGCAACGTCATCAATGA 1723 ||| | | |||||| ||| ||||||| || ||||| | |||| |||||||| Sbjct 13959 CCCCATAAACTCTTTAAAGT------GCTTTAGATAATGCGG-ATCGACGTTATCAATGA 14011 Query 1724 CGTTGTATGCGACCTCGTGTTGAGTAGACCCTCGGATTGAAATCGAGGTGTCCACTGAGA 1783 ||| || | | | | |||| || | | ||| ||||| | || || | || Sbjct 14012 TGTTATACCAGGCATTAT-TTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGG 14070 Query 1784 TAATTGTGTGGACCTTTAGTTCGCGCCCAC 1813 ||||| ||||| ||| || || |||||| Sbjct 14071 TAATTATGTGGTCCTAAAGATCTTGCCCAC 14100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8099483941176