Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_015487.1 Length=2641 Score E Sequences producing significant alignments: (Bits) Value seq19028 129 1e-26 >seq19028 Length=31091 Score = 129 bits (142), Expect = 1e-26 Identities = 214/307 (70%), Gaps = 8/307 (3%) Strand=Plus/Plus Query 1550 GAGGAAATCTTTATAGCTAGCACCCTCACCAGGATTGCAAAGCACGATTGATGGGATCCC 1609 |||||| ||||||||||| | | |||||||||||| | | ||||| || ||||| Sbjct 13842 GAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCC 13901 Query 1610 GCCTTTAATTTGAACTGGCTTGCCGTACTTACAATTTGATTG-CCAGTCCTTTTGGGCCC 1668 || || || | || ||| | ||||| || | ||| | | ||| | ||||||||| Sbjct 13902 ACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTTGGGCCC 13960 Query 1669 CAATCAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACGTCATCAATGACGT 1728 | || || ||||| |||||||||| ||| ||||| |||||| |||||||| || Sbjct 13961 CCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGACGTTATCAATGATGT 14014 Query 1729 TATACTCCACTTCGTTTTGGTACACTCGAGCATTGAAATCCAGGTGTCCACTAAGATAAT 1788 ||||| | | ||| || | | | ||| ||||| | || || | || |||| Sbjct 14015 TATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAAT 14074 Query 1789 TATGTGGGCCCAAAGCACGAGCCCACATTGTCTTCCCCGTTCTTGAATCACCTTCGACGA 1848 ||||||| || |||| | |||||| ||||||||| ||||| || ||||| || | || Sbjct 14075 TATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGA 14134 Query 1849 TGATACT 1855 ||||| Sbjct 14135 CAATACT 14141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8339397565026