Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_015962.1 Length=2625 Score E Sequences producing significant alignments: (Bits) Value seq19028 125 1e-25 >seq19028 Length=31091 Score = 125 bits (138), Expect = 1e-25 Identities = 245/355 (69%), Gaps = 18/355 (5%) Strand=Plus/Plus Query 1523 TTTTCCTCTTTGTTCAGGAAATCTTTATAGCTGGCACCCTCACCTGGATTGCAGAGCACG 1582 |||||||| | | ||||| ||||||||||||| | ||| |||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1583 ATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTACTTGCAATTTGACTG--CC 1640 |||| || ||||| || || || | || ||| | ||||| || | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1641 AGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTTAAGTATTGCGGAGAGA 1700 | | |||||||||| | | |||||| ||||||| || || |||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTT------TAGATAATGCGGATCGA 13999 Query 1701 CGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAACCTTTGAGTTGAAGTCCAG 1758 ||| |||||||| |||||| ||| | | || || |||| || || || || | Sbjct 14000 CGTTATCAATGATGTTATA--CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAA 14057 Query 1759 GTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCACATCGTCTTGCCTGTTCT 1818 || || | || ||||||||||| ||||| | | |||||| ||||| |||||||| Sbjct 14058 ATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCT 14117 Query 1819 TGAATCACCCTCAACTATGAGACTTATTGGACGAT-TTGGCCGCGCAGCGGAATC 1872 || |||||||||| | | ||| | || || | |||||||||||||| ||| Sbjct 14118 AGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8288215991938