Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016082.1 Length=2621 Score E Sequences producing significant alignments: (Bits) Value seq19028 167 4e-38 >seq19028 Length=31091 Score = 167 bits (184), Expect = 4e-38 Identities = 287/412 (70%), Gaps = 11/412 (3%) Strand=Plus/Plus Query 1460 TGTGAGGGTGATGAAGATCGCATTCTTGATAGTCCAGTTTCTTAGTCCTGCATTTTCCTC 1519 ||||| |||| ||| ||||| | | || ||| ||| ||| | ||||| || Sbjct 13776 TGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTC 13835 Query 1520 TTTGTCCAGGAACTCTTTATAGCTGGAACCCTCACCAGGATTGCAAAGCACGATTGCTGG 1579 | || ||||||||||||||||||||| |||||||||||| | | ||||| || Sbjct 13836 CTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGG 13895 Query 1580 GATTCCACCTTTAATTTGAACAGGCTTACCGTATTTGCAATTTGACTG--CCAATCTTTT 1637 || ||||| || || | |||||| | |||||||| | ||| ||| ||||| || Sbjct 13896 TATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACCAATTGCTT 13953 Query 1638 TGGGCCCCCAGCAATTCTTTCCAGTGCTTTAGCTTTAGATATTGCGGTGCGACGTCATCA 1697 |||||||||| || ||||| |||||||||| ||| ||||| |||||| |||| Sbjct 13954 TGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGACGTTATCA 14007 Query 1698 ATGACGTTATACTCCACCGCGTTTGAATAGACTCGACCATTGAAGTCCAGGTGTCCACTG 1757 |||| ||||||| | |||||||| | | | ||| || || | || || | Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1758 AGATAGTTATGTGGGCCTAACGCACGTGCCCACATCGTCTTCCCTGTTCTTGAATCACCT 1817 || || |||||||| ||||| | | ||||||| |||||||||||||| || ||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1818 TCTACTATGAGACTTAATGGTC-TATCTGGCCGCGCAGCGGAACCCCTACCA 1868 || | | | ||| |||| | |||||||||||||| | ||||| || Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACA 14179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8275420598666