Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016573.1 Length=2678 Score E Sequences producing significant alignments: (Bits) Value seq19028 114 2e-22 >seq19028 Length=31091 Score = 114 bits (126), Expect = 2e-22 Identities = 238/349 (68%), Gaps = 14/349 (4%) Strand=Plus/Plus Query 1567 TTTTCCTCCTTGTCGAGATACTCTTTATAACTGGCCCCCTCTCCAGGATTGCAGAGCACG 1626 |||||||||| |||| |||||||||| |||| ||||||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1627 ATTGATGGGATACCCCCTTTAATCTTTCTTGGCTTGCCGTACTTGCAATTTGACTG--CC 1684 |||| || || || || || |||||| ||| | ||||| || | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1685 ACTCTTTTTGAGCACCAATCAATTCCTTCCAGTGCTTTAGCTTTAGGTAATGGGGTGTGA 1744 | | |||| || || || || || || |||||||||| | |||| || || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT------AATGCGGATCGA 13999 Query 1745 CATCATCGATGACGTTATACTCAGCTTCGTCTGAGTAGACCCGGGAATTGAAATCTAGAT 1804 | | ||| |||| ||||||| || | | ||| || | ||| ||||||| || Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1805 GGCCGCTTAAGTAATTATGTGGGCCTAATGCACGAGCCCACATCGTCTTGCCCGTTCGAG 1864 | |||| || |||||||||||| ||||| | | |||||| ||||| || |||| || Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1865 AGTCACCCTCAACAATTAAACTTATGGG-CCTCTCTGGCCGCGCAGCGG 1912 | |||||||||| | | ||| |||| | | |||||||||||||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8457754952792