Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016574.1 Length=2649 Score E Sequences producing significant alignments: (Bits) Value seq19028 131 3e-27 >seq19028 Length=31091 Score = 131 bits (144), Expect = 3e-27 Identities = 240/349 (69%), Gaps = 11/349 (3%) Strand=Plus/Plus Query 1555 TTTTCCTGCTTCTCCAGGAAATCTTTATAGCTGGCCCCCTCTCCAGGATTGCATAGCACG 1614 |||| | || ||| ||||| ||||||||||||| ||||||||||| | | | Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1615 ATTGATGGGATACCCCCTTTAATTTGAACAGGCTTGCCGTACTTGCAATTGGACTG--CC 1672 |||| || || || || || || | |||||| | ||||| || ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTG--CTGGACC 13945 Query 1673 AATCTTTTTGAGCACCAATCAATTCCTTCCAGTGCTTTAGCTTTAGGTATTGCGGGCTGA 1732 ||| |||| || || || || || || |||||||||| | | ||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT------AATGCGGATCGA 13999 Query 1733 CATCATCGATGACGTTATACTCAACTTGATTTGAGTAGACCCGGGAATTGAAATCTAAAT 1792 | | ||| |||| ||||||| | | |||||| || | ||| |||||||||| Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1793 GGCCACTCAAGTAATTATGTGGGCCTAATGCTCTAGCCCACATCGTCTTACCAGTTCGAG 1852 | || | | |||||||||||| ||||| | ||| |||||| ||||| || |||| || Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1853 AATCACCTTCAACTATTATACTTATGGG-CCTAACAGGCCGCGCAGCGG 1900 | ||||| |||| | ||||| |||| | | | ||||||||||||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8364988351570