Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016575.1 Length=2727 Score E Sequences producing significant alignments: (Bits) Value seq19028 188 1e-44 >seq19028 Length=31091 Score = 188 bits (208), Expect = 1e-44 Identities = 276/387 (71%), Gaps = 5/387 (1%) Strand=Plus/Plus Query 1606 CCAAATTTTTAATTGTGCATTTTTAGGCTCCTCCAGATATTCTTTATAGGAGGATTGTGG 1665 |||| ||||||||| |||||| |||||| || | ||||||||| ||| || Sbjct 13809 CCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGG 13868 Query 1666 ACCAGGATTGCAGAGGAAGATGGTGGGAATGCCTCCTTTAATTTGAACTGGTTTACTGTA 1725 |||||||||||| | |||||| || || || || || || || | || || | | ||| Sbjct 13869 ACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTA 13928 Query 1726 CTTGACGTTACTCTGCCAGTTATGCTGGGCCCCCATGAATTCTTTAAAATGCTTTAGATA 1785 || || || || ||| || ||||||||||| || |||||||| ||||||||||| Sbjct 13929 TTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATA 13988 Query 1786 GTGCGGATCTACGTCATCAATGACGTTATACCAGGCATTATTATTATAGACCTTCAATGA 1845 |||||||| |||| |||||||| |||||||||||||||||| ||| | || || | Sbjct 13989 ATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAA--TTTTATTA 14046 Query 1846 T--AGATCTATATGGCCACACATATAATTATGTGGCCCTAATGCACGGGCCCACTTTGTT 1903 | | ||||| ||| || || | ||||||||||| ||||| | | ||||||| ||| Sbjct 14047 TTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTC 14106 Query 1904 TTACCACTCCTGCTGGGCCCCTCTATGACAATTGATAATGGTC-TATCTGGCCGCGCAGC 1962 || || | || ||||| |||||||| |||| | |||||||||||| Sbjct 14107 TTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGC 14166 Query 1963 GGGTCCCATCACATTTTTTGATGCCCA 1989 || || | ||||||| | |||||| Sbjct 14167 GGCATCCCTAACATTTTCAGCTGCCCA 14193 Score = 91.5 bits (100), Expect = 3e-15 Identities = 242/364 (66%), Gaps = 7/364 (2%) Strand=Plus/Plus Query 935 GAATCACACTGAGAATGCACTGCTCTTGTATATGGCATGTACGCATGCTTCTAATCCTGT 994 || ||| ||||| |||||| || |||||||| | || ||||| ||||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 995 GTATGCGTCGCTTAAAGTCAGGATATATTTCTATGACTCTGTTGGGAATTAATAAATTTT 1054 ||| | | | | | | ||||| ||||| ||| ||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1055 AAATTTTATATCATG-CGTACATATTACATCTATTGTTCCTTCCCATACATCATACAATA 1113 |||||||| ||||| | || | |||||| | |||| || ||||| | |||| Sbjct 13197 GAATTTTATTTCATGATATTCA-AGTACATCCACTGTTTGCTCAATTACATTGAATAATA 13255 Query 1114 CATGGTCTACAGACCTGATTACATTGTTTACACTAATGACGCCTAATGCGTCCAAATATC 1173 ||| |||||||| || || | |||||| | |||||| || |||||| ||| ||| || Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1174 TATTAACTTGTATCTTGAAGGATCTCAGACAGCTCGTA-CTCGAACTCCAGGAAGTCGTC 1232 | | || | | || || ||| | | | |||| ||| | | || ||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTA-AGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1233 CAGACTTGGAAGTTCATGTAACATTTGTGTAGTCCCAATGCTTGCCTCAGGTTGTGGTTG 1292 | || | |||||| | | || |||||| || || | | | |||||||||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1293 AATC 1296 |||| Sbjct 13435 AATC 13438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8614498520374