Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016578.1 Length=2725 Score E Sequences producing significant alignments: (Bits) Value seq19028 91.5 3e-15 >seq19028 Length=31091 Score = 91.5 bits (100), Expect = 3e-15 Identities = 231/349 (66%), Gaps = 12/349 (3%) Strand=Plus/Plus Query 1610 TTTTCCTCTTTCTCGAGGAAGTCTTTATAGCTGGACCCTTCCCCTGGATTGCAAAGCACG 1669 |||||||| ||||||||| |||||||||||||| || |||||||| | | | Sbjct 13831 TTTTCCTC---CTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1670 ATTGATGGGATACCGCCTTTAATTTGAACGGGTTTCCCGTATTTGCAGTTACTTTGCCAG 1729 |||| || || || || || || | || || | |||||||| || || ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1730 TCTCGTTGGGCCCCAACGAGTTCTTTCCAGTGCTTTAGCTTTAGGTAGTGCGGGGCAACG 1789 | | ||||||||| | | ||||| ||| ||||||| || ||||| | ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGT------GCTTTAGATAATGCGGATCGACG 14001 Query 1790 TCATCGATGACGTTGTATGCGACCTCGTTTGAGTAGACCCTCGAGTTGAAGTCGAGGTGT 1849 | ||| |||| ||| || | | | ||||| || | | || || || | || Sbjct 14002 TTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGA 14061 Query 1850 CCACTGAGATAATTGTGGGGACCTAAAGCACGCGCCCACATCGTCTTCCCCGTCCTCGAA 1909 || | || ||||| || || ||||||| | |||||| |||||||| || || || Sbjct 14062 CCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGAC 14121 Query 1910 TCTCCCTCGACGATCAGACTTATCGGTCTGTT--TGGCCGCGCTTCGGC 1956 || ||||| | || | ||| | |||| ||| ||||||||| |||| Sbjct 14122 TCACCCTCAATGACAATACTCTTGGGTC-GTTAATGGCCGCGCAGCGGC 14169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8608100823738