Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016649.1 Length=2750 Score E Sequences producing significant alignments: (Bits) Value seq19028 244 2e-61 >seq19028 Length=31091 Score = 244 bits (270), Expect = 2e-61 Identities = 480/705 (68%), Gaps = 25/705 (4%) Strand=Plus/Plus Query 1624 CCAGTTCTTTAGTGCAGTGTTCTTTTCCTCGTCCAGGAATTCTTTATAACTGCTGTTAGG 1683 ||| || |||| | | | || |||||||| || ||||| |||||||| ||| |||| Sbjct 13809 CCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGG 13868 Query 1684 ACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTA 1743 |||||||||||| | ||||||||| ||||| || || || || | || ||| | ||||| Sbjct 13869 ACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTA 13928 Query 1744 CTTT---GTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTGAG 1800 ||| || |||| ||| | |||||||||||||| |||||||||||||| || || Sbjct 13929 TTTTACCTTGCTGGA---CCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG 13985 Query 1801 GAAGTGCGGATCAACGTCATCAATGACGTTATACCAAGCGTCATTACTGTACACCTTTGG 1860 | |||||||| |||| |||||||| ||||||||| || | ||| || | || Sbjct 13986 ATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATT 14045 Query 1861 GCTTAGATCTAAATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAGCCCACATTGT 1920 | | ||||||||| || |||| || |||||||| |||||||| || |||||| ||| Sbjct 14046 ATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGT 14105 Query 1921 TTTCCCAGTACGACTGTCGCCCTCAATTACTATACTTTGAGGTC-TCAGGGGCCGCGCAG 1979 ||||| || | | || |||||||| || ||||| | |||| | | |||||||||| Sbjct 14106 CTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAG 14165 Query 1980 CGGCGTCGACAACATTTACACACGCCCACTCTTCAAGTTCTTCTGGAACTTGATCGAAAG 2039 |||| || ||||||| || ||||| |||| ||| | ||| | Sbjct 14166 CGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA-------------TTG-TTGAAGG 14211 Query 2040 AAGAAGACGAAAAAGGAGAAACATAAGGAGCTGGTGGCTCCTGAAAGATCCTGTCTAGAT 2099 ||||| | ||||||| ||||||||| | || || | || || | |||| | Sbjct 14212 AAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATT 14271 Query 2100 TTGCATTTAAATTATGAAATTGTAGTACAAAATCTTTAGGAGCTAGTTCCTTAATGACTC 2159 ||| | || ||||||| |||| | || ||| | | || | ||| |||| | Sbjct 14272 TTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAG 14331 Query 2160 TAAGAGC--CTCCGACTTACTTCCCGCGTTAAGTGCTGCGGCGTAAGCGTCGTTGGCTGT 2217 ||| || || | | | | | | | |||| ||| | || | | || || | ||| Sbjct 14332 AAAGCGCTTCTTCAATTGATGTAGCAC-TTAA-CGCTTCTGCAGATACATCATTTGTTGT 14389 Query 2218 CTGTTGCCCTCCTCTTGCTGATCTTCCATCGATCTGAAATTCTCCCCAGTCGAGAATGTC 2277 ||| |||||||| || |||| ||||||||| ||||| | ||||||||| || Sbjct 14390 ATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATC 14449 Query 2278 CCCGTCCTTGGCGATGTAGGACTTGACGTCGGAGCTGGATTTAGC 2322 | ||| || |||||||| ||| || || || |||||||| Sbjct 14450 ACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Score = 102 bits (112), Expect = 1e-18 Identities = 293/445 (66%), Gaps = 17/445 (4%) Strand=Plus/Plus Query 950 GAATCACACTGAGAATGCTTTGTTGTTGTACATGGCATGTACCCATGCCTCTAACCCCGT 1009 || ||| ||||| ||||| ||||||| | || | || ||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1010 GTATGCTACTTTGAAAGTTAGAAGTTATTTCTATGATTCTGTAACCAATTAATATTAATA 1069 ||| |||| ||| | | |||||||| ||||| |||| | ||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTA------ATA 13190 Query 1070 AATATCGAATTTTATTTC-TGAAACTTGGTCTACATACATAGTTTGTTCTATTTTACTGT 1128 ||||| |||||||||||| ||| | || ||||| || ||||| || ||| | || Sbjct 13191 AATATTGAATTTTATTTCATGATA-TTCAAGTACATCCACTGTTTGCTCAATTACATTGA 13249 Query 1129 ACAATACATGATCTACTGCTCTAATAATCGAATTAATTGAGATTACTCCTATATTGTTGA 1188 | ||||||| ||||| ||||||||||| ||||| || || |||| || | Sbjct 13250 ATAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTA 13309 Query 1189 GATACTTTATGACTTGGGTCTTGAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGG 1248 | | || || || | || ||||| |||||||||| |||||||| |||| Sbjct 13310 AAAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAAC 13369 Query 1249 TCGTCCAAACCCGGAAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGT 1308 |||| | | |||| | || ||| ||||| | ||| | ||| ||||||| Sbjct 13370 GAGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGT 13429 Query 1309 AGTTGAATTGGATCCTGATTGTTATTATGTCCATCTTGCTCGAGT---AAGGACAGACCT 1365 ||||||| | || ||| |||||||| ||| |||| | || | || | Sbjct 13430 GGTTGAATCGAATTTGTATTTCGATTATGTC--GGTTG-TCGAATTTGTTGGTCTGAGAT 13486 Query 1366 CGTGGCTTAGGATCTTGAAATAAAG 1390 |||| | |||||||||||||| || Sbjct 13487 TGTGGTTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8688072031688