Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016660.1 Length=2740 Score E Sequences producing significant alignments: (Bits) Value seq19028 244 2e-61 >seq19028 Length=31091 Score = 244 bits (270), Expect = 2e-61 Identities = 490/721 (68%), Gaps = 29/721 (4%) Strand=Plus/Plus Query 1611 GCATTCTTCACTGCCCAGTTCTTTAGTGCGGTGTTCTTTTCCTCATCTAGGAATTCTTTA 1670 ||||| | || | ||| || |||| | | || |||||||| || ||||| |||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1671 TAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGA 1730 || ||| | |||||||||||||| | ||||||||| ||||| || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1731 ACTGGCTTCCCGTACTTT---GTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAATTCT 1787 || ||| | ||||| ||| || |||| ||| | |||||||||||||| || ||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTGCTGGA---CCAATTGCTTTGGGCCCCCATAAACTCT 13971 Query 1788 TTAAAGTGCTTGAGGAAGTGCGGATCTACGTCATCAATGACGTTATACCAAGCGTCGTTA 1847 ||||||||||| || | |||||||| |||| |||||||| ||||||||| || | || Sbjct 13972 TTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTT 14031 Query 1848 CTGTACACCTTTGGGCTTAGATCTAAATGCCCACATAAATAGTTATGTGGGCCTAAAGAC 1907 || | || | | ||||||||| || |||| || |||||||| |||||||| Sbjct 14032 GAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGAT 14091 Query 1908 CTAGCCCACATTGTCTTCCCAGTACGACTGTCACCCTCAATCACTATACTTTGAGGTC-T 1966 || |||||| ||||||||| || | | ||||||||||| || ||||| | |||| | Sbjct 14092 CTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGT 14151 Query 1967 CAAGGGCCGCGCAGCGGCA---CTGACGATGTTCTCGGCAGCCCACTCTTCAAGTTCTTC 2023 || ||||||||||||||| || || || || || ||||| |||| Sbjct 14152 TAATGGCCGCGCAGCGGCATCCCTAAC---ATTTTCAGCTGCCCAGCACTCAA------- 14201 Query 2024 TGGAACTTGATCAAAGGAAGAGGAAGAAAAAGGAGAGACATAAACCTCCATTGGAGGTGT 2083 ||| | |||||||| || ||||||| |||||| || || || | Sbjct 14202 ------TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCAT 14254 Query 2084 AAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAGTACATAATCTTTTGGTGC 2143 || || | |||||| || | | || ||||||| |||| | || | | | | ||| Sbjct 14255 GAATATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCAT 14314 Query 2144 TAATTCTTTAATGATTCTAATAGCCTC-TGACTTACTGCCTGCGTTAAGTGCTGCGGCGT 2202 | |||| |||| || || || || | | || || || | | ||| | || Sbjct 14315 TTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG-TAGCACTTAACGCTTCTGCAG 14373 Query 2203 AAGCGTCATTGGCTGACTGTTGTCCCCCTCTTGCAGATCTTCCATCGATCTGAAACTCTC 2262 | | ||||| | || ||| || ||||| ||||||| ||||||||| ||||| | | Sbjct 14374 ATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGC 14433 Query 2263 CCCAGTCGAGGGTGTCTCCGTCCTTCTCGACGTATGACTTGACGTCCGAGCTTGATTTAG 2322 |||||||| | || | ||| ||| ||| |||| ||| || || || |||||||| Sbjct 14434 CCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAG 14493 Query 2323 C 2323 | Sbjct 14494 C 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8656083548508